RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	ATP2B2	Q01814	1243 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	COG2	Q14746	738 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TSGA10IP	Q3SY00	556 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	RRP12	Q5JTH9	1297 aa	Known RBP	11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PPP4R3B	Q5MIZ7	849 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	CREB3L3	Q68CJ9	461 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	DGKH	Q86XP1	1220 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ENAH	Q8N8S7	591 aa	Predicted RBP	11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ATG4C	Q96DT6	458 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	KRT23	Q9C075	422 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PORCN	Q9H237	461 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ANO2	Q9NQ90	1003 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PTPN22	Q9Y2R2	807 aa		11.94	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PLA2G6	O60733	806 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	GNRH1	P01148	92 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TOP1	P11387	765 aa	Known RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PSMC4	P43686	418 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PKN2	Q16513	984 aa	Known RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PRPF38B	Q5VTL8	546 aa	Known RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SLFN13	Q68D06	897 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	RASEF	Q8IZ41	740 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	USP6NL	Q92738	828 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TANGO6	Q9C0B7	1094 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	EFCC1	Q9HA90	598 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SRRD	Q9UH36	339 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZNF214	Q9UL59	606 aa	Predicted RBP	11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	STX8	Q9UNK0	236 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TRIM17	Q9Y577	477 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PLXNB2	O15031	1838 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZNF236	Q9UL36	1845 aa		11.93	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TNKS	O95271	1327 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MYH4	Q9Y623	1939 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	VWA5A	O00534	786 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ATP2A1	O14983	1001 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	EPB41L2	O43491	1005 aa	Known RBP	11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	FLOT1	O75955	427 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	IGHA2	P01877	340 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PDHB	P11177	359 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	HSPA4	P34932	840 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TMEM132B	Q14DG7	1078 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	BTNL9	Q6UXG8	535 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	KIAA1211	Q6ZU35	1233 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MB21D1	Q8N884	522 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	GPRC5A	Q8NFJ5	357 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZKSCAN3	Q9BRR0	538 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	TOMM22	Q9NS69	142 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	HOXC10	Q9NYD6	342 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	GJD2	Q9UKL4	321 aa		11.92	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	BMP3	P12645	472 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PRMT2	P55345	433 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	FCGRT	P55899	365 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PRKCZ	Q05513	592 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	IRF5	Q13568	498 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MORN1	Q5T089	497 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	CASC1	Q6TDU7	716 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SHCBP1	Q8NEM2	672 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	IGDCC4	Q8TDY8	1250 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	DCAF4	Q8WV16	495 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ARMC5	Q96C12	935 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SLF1	Q9BQI6	1058 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MTA3	Q9BTC8	594 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SENP2	Q9HC62	589 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	GABRQ	Q9UN88	632 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	HPS5	Q9UPZ3	1129 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PTCH2	Q9Y6C5	1203 aa		11.91	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZNF536	O15090	1300 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MGAM	O43451	1857 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	MCC	P23508	829 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ZNF543	Q08ER8	600 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SLC35G1	Q2M3R5	365 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	ADCK5	Q3MIX3	580 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	CCDC178	Q5BJE1	867 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	IQCA1	Q86XH1	822 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PRPF38A	Q8NAV1	312 aa	Known RBP	11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	NCOA7	Q8NI08	942 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	PAGR1	Q9BTK6	254 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SPATC1L	Q9H0A9	340 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	SLC38A10	Q9HBR0	1119 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	FEM1B	Q9UK73	627 aa		11.9	□□□□□ -0.5
CALCOCO1-222	ENST00000553154	WDR19	Q8NEZ3	1342 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	TNPO2	O14787	897 aa	Known RBP	11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	MAPK4	P31152	587 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	SLC1A4	P43007	532 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	EXOSC10	Q01780	885 aa	Known RBP	11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	KIF22	Q14807	665 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	TTBK2	Q6IQ55	1244 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	KCTD1	Q719H9	257 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	GPR142	Q7Z601	462 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	FAM160B2	Q86V87	743 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	RIOX2	Q8IUF8	465 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	PNMA1	Q8ND90	353 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	IL17RA	Q96F46	866 aa		11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	GPHN	Q9NQX3	736 aa	Predicted RBP	11.89	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	TMEM232	C9JQI7	657 aa		11.88	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	SH2B2	O14492	632 aa	Predicted RBP	11.88	□□□□□ -0.51
CALCOCO1-222	ENST00000553154	REC8	O95072	547 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms