RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ASPRV1Q53RT3 343 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 CATSPERGQ6ZRH7 1159 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 SPICE1Q8N0Z3 855 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 LRRC2Q9BYS8 371 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 RPAP3Q9H6T3 665 aaPredicted RBP20.1■□□□□ 0.81
ITGA5-213ENST00000553071 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 PDHXO00330 501 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 SNHG28P0DPA3 235 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 FDX1P10109 184 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 CPA1P15085 419 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 GNAQP50148 359 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 COG2Q14746 738 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 GPAT2Q6NUI2 795 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 FAM160B2Q86V87 743 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 ZNF654Q8IZM8 581 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 CTCFLQ8NI51 663 aaPredicted RBP20.09■□□□□ 0.81
ITGA5-213ENST00000553071 BRF1Q92994 677 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 CHMP4CQ96CF2 233 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 PARK7Q99497 189 aaKnown RBP20.09■□□□□ 0.81
ITGA5-213ENST00000553071 TANGO6Q9C0B7 1094 aa20.09■□□□□ 0.81
ITGA5-213ENST00000553071 MYPNQ86TC9 1320 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 CCDC196A0A1B0GTZ2 297 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 CA12O43570 354 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 PARP1P09874 1014 aaKnown RBP20.08■□□□□ 0.81
ITGA5-213ENST00000553071 PDHBP11177 359 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 EVCP57679 992 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 TROAPQ12815 778 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 CCDC96Q2M329 555 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 TCEANC2Q96MN5 208 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 KIF2CQ99661 725 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 PTPN18Q99952 460 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 LZTS2Q9BRK4 669 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 ZFYVE28Q9HCC9 887 aa20.08■□□□□ 0.81
ITGA5-213ENST00000553071 ISY1Q9ULR0 285 aaKnown RBP20.08■□□□□ 0.81
ITGA5-213ENST00000553071 PHIPQ8WWQ0 1821 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 ZBTB43O43298 467 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 MCM2P49736 904 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 STAT2P52630 851 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 FAM83BQ5T0W9 1011 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 PRPF38AQ8NAV1 312 aaKnown RBP20.07■□□□□ 0.8
ITGA5-213ENST00000553071 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
ITGA5-213ENST00000553071 ZIC5Q96T25 663 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 MTMR7Q9Y216 660 aa20.07■□□□□ 0.8
ITGA5-213ENST00000553071 KLF18A0A0U1RQI7 1052 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 IGF2BP3O00425 579 aaKnown RBP eCLIP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 FLOT1O75955 427 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 GCLCP48506 637 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 IKQ13123 557 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 TAF1CQ15572 869 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 APOA5Q6Q788 366 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 FAM43AQ8N2R8 423 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 MB21D1Q8N884 522 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 SMCR8Q8TEV9 937 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 NUP133Q8WUM0 1156 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 ASCC2Q9H1I8 757 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 GPHNQ9NQX3 736 aaPredicted RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 RBM28Q9NW13 759 aaKnown RBP20.06■□□□□ 0.8
ITGA5-213ENST00000553071 SAGE1Q9NXZ1 904 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 PNMA2Q9UL42 364 aa20.06■□□□□ 0.8
ITGA5-213ENST00000553071 TMEM232C9JQI7 657 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 SMARCA1P28370 1054 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 COL9A3Q14050 684 aaPredicted RBP20.05■□□□□ 0.8
ITGA5-213ENST00000553071 GRM4Q14833 912 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 KIAA1755Q5JYT7 1200 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 FANCBQ8NB91 859 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 SLF1Q9BQI6 1058 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 CFHR5Q9BXR6 569 aa20.05■□□□□ 0.8
ITGA5-213ENST00000553071 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
ITGA5-213ENST00000553071 CTDP1Q9Y5B0 961 aaPredicted RBP20.05■□□□□ 0.8
ITGA5-213ENST00000553071 PALM3A6NDB9 673 aaPredicted RBP20.04■□□□□ 0.8
ITGA5-213ENST00000553071 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
ITGA5-213ENST00000553071 DSG3P32926 999 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 APOBRQ0VD83 1088 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 DGKZQ13574 1117 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 TOB2Q14106 344 aaPredicted RBP20.04■□□□□ 0.8
ITGA5-213ENST00000553071 LBX2Q6XYB7 198 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 SENP2Q9HC62 589 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 PPP1R9AQ9ULJ8 1098 aa20.04■□□□□ 0.8
ITGA5-213ENST00000553071 KLRF2D3W0D1 207 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 ZBED4O75132 1171 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 AK2P54819 239 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 KCTD1Q719H9 257 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 MICU3Q86XE3 530 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 ZSCAN31Q96LW9 406 aaPredicted RBP20.03■□□□□ 0.8
ITGA5-213ENST00000553071 NUP88Q99567 741 aaPredicted RBP20.03■□□□□ 0.8
ITGA5-213ENST00000553071 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
ITGA5-213ENST00000553071 GPCPD1Q9NPB8 672 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 BRPF3Q9ULD4 1205 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 LIMCH1Q9UPQ0 1083 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 MYH4Q9Y623 1939 aa20.03■□□□□ 0.8
ITGA5-213ENST00000553071 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
ITGA5-213ENST00000553071 TLR2O60603 784 aa20.02■□□□□ 0.8
ITGA5-213ENST00000553071 PDIA3P30101 505 aaKnown RBP20.02■□□□□ 0.8
ITGA5-213ENST00000553071 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.8
ITGA5-213ENST00000553071 HERVK_113P62684 666 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms