RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 C1orf127Q8N9H9 656 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 MYRIPQ8NFW9 859 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 GMCL1Q96IK5 515 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 MYD88Q99836 296 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 HAUS7Q99871 368 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 NUP62CLQ9H1M0 184 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 CHRDQ9H2X0 955 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 EFCC1Q9HA90 598 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 NPHS2Q9NP85 383 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 CFAP45Q9UL16 551 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 KIF3AQ9Y496 699 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 FPGT-TNNI3KV9GXZ4 949 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 TMEM94Q12767 1356 aa7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 SETD1BQ9UPS6 1966 aaKnown RBP7.02□□□□□ -1.29
CHMP4A-210ENST00000552620 NPHP3Q7Z494 1330 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 NPHP4O75161 1426 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 SIPA1L3O60292 1781 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 PXDNQ92626 1479 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 DCDC2BA2VCK2 349 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 PRAMEF22A3QJZ6 481 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 SLC35F4A4IF30 521 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 EREGO14944 169 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 CTAGE5O15320 804 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 EDN3P14138 238 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 IRS1P35568 1242 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 FANCCQ00597 558 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 DNTTIP2Q5QJE6 756 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 TTC6Q86TZ1 520 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 NT5DC4Q86YG4 428 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 GTF3C6Q969F1 213 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 DCAF5Q96JK2 942 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 SPATA32Q96LK8 384 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 FMNL2Q96PY5 1086 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 HELLSQ9NRZ9 838 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
CHMP4A-210ENST00000552620 RGPD2P0DJD1 1756 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 SASH3O75995 380 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 RARAP10276 462 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 TNP2Q05952 138 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 LRRFIP1Q32MZ4 808 aaKnown RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 EPHA10Q5JZY3 1008 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 C9orf131Q5VYM1 1079 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 NAA16Q6N069 864 aaPredicted RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 PI16Q6UXB8 463 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 CDC37L1Q7L3B6 337 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 DHX32Q7L7V1 743 aaKnown RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 KRT25Q7Z3Z0 450 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 LRP10Q7Z4F1 713 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 TRIM22Q8IYM9 498 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 TTC5Q8N0Z6 440 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 PLBD2Q8NHP8 589 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 SMARCC2Q8TAQ2 1214 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 KIAA1524Q8TCG1 905 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 LEO1Q8WVC0 666 aaPredicted RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 GSX2Q9BZM3 304 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 SIL1Q9H173 461 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 TNMDQ9H2S6 317 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 CLSTN2Q9H4D0 955 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 ATG3Q9NT62 314 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 TLR7Q9NYK1 1049 aaKnown RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 MARK1Q9P0L2 795 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 DBNLQ9UJU6 430 aaKnown RBP7□□□□□ -1.29
CHMP4A-210ENST00000552620 PHF24Q9UPV7 400 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 SH3TC1Q8TE82 1336 aa7□□□□□ -1.29
CHMP4A-210ENST00000552620 A0A087WZG4 1122 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 SOBPA7XYQ1 873 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 H3BQV1 296 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 PFKFB2O60825 505 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 PSAPP07602 524 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 CTSHP09668 335 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 MAPTP10636 758 aaKnown RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 MYL6BP14649 208 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 IL15P40933 162 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 VEGFBP49765 207 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 CASP7P55210 303 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 TFCP2Q12800 502 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 CHAF1AQ13111 956 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 RESTQ13127 1097 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 SLC39A6Q13433 755 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 NAALADL2Q58DX5 795 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 Q6ZUG5 572 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 ZNF589Q86UQ0 364 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 FBXL16Q8N461 479 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 CCDC155Q8N6L0 562 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 KBTBD3Q8NAB2 608 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 OR13H1Q8NG92 308 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 TDRD7Q8NHU6 1098 aaKnown RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 ZNF496Q96IT1 587 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms