RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 RNF20Q5VTR2 975 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 OTUD7BQ6GQQ9 843 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 SPICE1Q8N0Z3 855 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 ANKS1AQ92625 1134 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 IL17RAQ96F46 866 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
CCDC59-207ENST00000552606 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 ZKSCAN3Q9BRR0 538 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 ASCC2Q9H1I8 757 aaPredicted RBP10.75□□□□□ -0.69
CCDC59-207ENST00000552606 RPAP3Q9H6T3 665 aaPredicted RBP10.75□□□□□ -0.69
CCDC59-207ENST00000552606 GOPCQ9HD26 462 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 STX8Q9UNK0 236 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 SNX14Q9Y5W7 946 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
CCDC59-207ENST00000552606 F5H6K3 240 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 TLR2O60603 784 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 TBC1D8O95759 1140 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 SNHG28P0DPA3 235 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 BCRP11274 1271 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 TOP1P11387 765 aaKnown RBP10.74□□□□□ -0.69
CCDC59-207ENST00000552606 KLRC3Q07444 240 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 TRDNQ13061 729 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 CATSPERGQ6ZRH7 1159 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 RALYLQ86SE5 291 aaKnown RBP10.74□□□□□ -0.69
CCDC59-207ENST00000552606 DGKHQ86XP1 1220 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 GMCL1Q96IK5 515 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 TTC14Q96N46 770 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 BEGAINQ9BUH8 593 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 WDR19Q8NEZ3 1342 aa10.74□□□□□ -0.69
CCDC59-207ENST00000552606 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
CCDC59-207ENST00000552606 FRMPD3Q5JV73 1810 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 PDHBP11177 359 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 HERVK_113P62684 666 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 CAP1Q01518 475 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC59-207ENST00000552606 KRT32Q14532 448 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 CCDC178Q5BJE1 867 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 FAM83BQ5T0W9 1011 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 C17orf99Q6UX52 265 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 NUP88Q99567 741 aaPredicted RBP10.73□□□□□ -0.69
CCDC59-207ENST00000552606 UBAC1Q9BSL1 405 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
CCDC59-207ENST00000552606 HTTP42858 3142 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 GPR25O00155 361 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 PRC1O43663 620 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 CNMDO75829 334 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 OSBPP22059 807 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 MCM5P33992 734 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 IRX3P78415 501 aaPredicted RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 EXOSC10Q01780 885 aaKnown RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 SLFN13Q68D06 897 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 DCAF4Q8WV16 495 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 NEK1Q96PY6 1258 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 TANGO6Q9C0B7 1094 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 LY9Q9HBG7 655 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
CCDC59-207ENST00000552606 FBXO28Q9NVF7 368 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
CCDC59-207ENST00000552606 MCM3APO60318 1980 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 PEX10O60683 326 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 GCLCP48506 637 aaPredicted RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 LBX1P52954 281 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 FAM110CQ1W6H9 321 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 REPS2Q8NFH8 660 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 SMCR8Q8TEV9 937 aaPredicted RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 GTF3C2Q8WUA4 911 aaPredicted RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 ZNF296Q8WUU4 475 aaPredicted RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 ATG4CQ96DT6 458 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 TMEM87BQ96K49 555 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 P2RX7Q99572 595 aaKnown RBP10.71□□□□□ -0.69
CCDC59-207ENST00000552606 TXNRD2Q9NNW7 524 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 MORF4L1Q9UBU8 362 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 PPP1R9AQ9ULJ8 1098 aa10.71□□□□□ -0.69
CCDC59-207ENST00000552606 NID2Q14112 1375 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms