RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 PUM3Q15397 648 aaKnown RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 SLC4A10Q6U841 1118 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 RETREG3Q86VR2 466 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 KLHDC4Q8TBB5 520 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 SRCIN1Q9C0H9 1055 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 TTYH1Q9H313 450 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 LOC285556D6RIA3 1793 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 SPTBN4Q9H254 2564 aa6.71□□□□□ -1.33
HOXB3-213ENST00000552000 LTBP2Q14767 1821 aa6.71□□□□□ -1.33
HOXB3-213ENST00000552000 VAMP4O75379 141 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 NBPF7P0C2Y1 421 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 CCNYL3P0C7X3 344 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 MS4A1P11836 297 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 SLC5A1P13866 664 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 ZKSCAN1P17029 563 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 FGFR2P21802 821 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 MAP3K10Q02779 954 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 PABPC4Q13310 644 aaKnown RBP eCLIP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 PICALMQ13492 652 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 SHHQ15465 462 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 CCL14Q16627 93 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 LINC01559Q495D7 138 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 C9orf50Q5SZB4 431 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 ANKRD44Q8N8A2 993 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 USP38Q8NB14 1042 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 PROCA1Q8NCQ7 364 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 IDI2Q9BXS1 227 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 SENP6Q9GZR1 1112 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 DDX4Q9NQI0 724 aaKnown RBP6.71□□□□□ -1.34
HOXB3-213ENST00000552000 PRKAG2Q9UGJ0 569 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 RLFQ13129 1914 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 MAST2Q6P0Q8 1798 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 KIF16BQ96L93 1317 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 FANCIQ9NVI1 1328 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 CACNA1AO00555 2505 aa6.71□□□□□ -1.34
HOXB3-213ENST00000552000 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 VARSP26640 1264 aaKnown RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 RTP1P59025 263 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 EXOSC9Q06265 439 aaKnown RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 PDE3AQ14432 1141 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 RABL6Q3YEC7 729 aaPredicted RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 WWC1Q8IX03 1113 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 TRMT44Q8IYL2 757 aaKnown RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 ZNF280CQ8ND82 737 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 SOCS4Q8WXH5 440 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 P2RX7Q99572 595 aaKnown RBP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.7□□□□□ -1.34
HOXB3-213ENST00000552000 MORF4L1Q9UBU8 362 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 TRANK1O15050 2925 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 REV3LO60673 3130 aa6.7□□□□□ -1.34
HOXB3-213ENST00000552000 RFX7Q2KHR2 1363 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 CACNA1HO95180 2353 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 RIF1Q5UIP0 2472 aaKnown RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 TIMP2P16035 220 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 MAPK4P31152 587 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 PLA2G5P39877 138 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 RGS2P41220 211 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 BTDP43251 543 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 SMAD3P84022 425 aaKnown RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 RRP1BQ14684 758 aaKnown RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 CCDC27Q2M243 656 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 CCAR1Q8IX12 1150 aaKnown RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 GPRC5AQ8NFJ5 357 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 LPIN2Q92539 896 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 USP6NLQ92738 828 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 BADQ92934 168 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 FAM122AQ96E09 287 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 APBA2Q99767 749 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 PORCNQ9H237 461 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 TXNRD2Q9NNW7 524 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 PRDM5Q9NQX1 630 aaPredicted RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 GNL3LQ9NVN8 582 aaKnown RBP6.69□□□□□ -1.34
HOXB3-213ENST00000552000 ATP11BQ9Y2G3 1177 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 GAKO14976 1311 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 IL16Q14005 1332 aa6.69□□□□□ -1.34
HOXB3-213ENST00000552000 USP17L5A8MUK1 530 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 EYA2O00167 538 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 CNGA1P29973 690 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 PHKA1P46020 1223 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 HERVK_113P62684 666 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 ERVK-9P63128 1117 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 ERVK-24P63145 666 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 MTMR2Q13614 643 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 ATP2B3Q16720 1220 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 SH3D19Q5HYK7 790 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 MFSD14CQ5VZR4 134 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 GPR142Q7Z601 462 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 PLEKHH3Q7Z736 793 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 DZIP1Q86YF9 867 aaKnown RBP6.68□□□□□ -1.34
HOXB3-213ENST00000552000 PAGR1Q9BTK6 254 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 OSBPL5Q9H0X9 879 aaPredicted RBP6.68□□□□□ -1.34
HOXB3-213ENST00000552000 PRKRIP1Q9H875 184 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms