RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MMP19Q99542 508 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 PHF24Q9UPV7 400 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 AKR1B1P15121 316 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 TLE2Q04725 743 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 KCTD2Q14681 263 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 DYNLL2Q96FJ2 89 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 ARMT1Q9H993 441 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
CHMP1A-210ENST00000551981 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 CLTBP09497 229 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 COPB2P35606 906 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 TMEM132BQ14DG7 1078 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 SIAH1Q8IUQ4 282 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 TINF2Q9BSI4 451 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 ROBO3Q96MS0 1386 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
CHMP1A-210ENST00000551981 APBB1O00213 710 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 MBD4O95243 580 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 PGK2P07205 417 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 RIOX2Q8IUF8 465 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 GOPCQ9HD26 462 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 DIS3Q9Y2L1 958 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-210ENST00000551981 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 PRKAB2O43741 272 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 HMMRO75330 724 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 AKR1A1P14550 325 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 FOSL2P15408 326 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 RAG1P15918 1043 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 STAT3P40763 770 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 CDK8P49336 464 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 C12orf60Q5U649 245 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 MYLIPQ8WY64 445 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 MYH7P12883 1935 aa17.08■□□□□ 0.32
CHMP1A-210ENST00000551981 A0A1W2PQ45 241 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 A0A1W2PQY0 241 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 KIAA0355O15063 1070 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 RAD21O60216 631 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 PGK1P00558 417 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 ADD2P35612 726 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 C16orf86Q6ZW13 317 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
CHMP1A-210ENST00000551981 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 USP17L21D6R901 530 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 VWA5AO00534 786 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 MS4A1P11836 297 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 FPGSQ05932 587 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 FBXO28Q9NVF7 368 aa17.06■□□□□ 0.32
CHMP1A-210ENST00000551981 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 DCDC2CA8MYV0 355 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 TOX2Q96NM4 488 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-210ENST00000551981 TTC28Q96AY4 2481 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 ZNF865P0CJ78 1059 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 ATP5JP18859 108 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 ITGB8P26012 769 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 STARD7Q9NQZ5 370 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 SLC4A4Q9Y6R1 1079 aa17.04■□□□□ 0.32
CHMP1A-210ENST00000551981 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 MOXD2PA6NHM9 499 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 ADAMTS4O75173 837 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 ACLYP53396 1101 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 EPHB4P54760 987 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 REPS2Q8NFH8 660 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 HAUS7Q99871 368 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms