RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	ARHGEF10L	Q9HCE6	1279 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SWAP70	Q9UH65	585 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	COL11A1	P12107	1806 aa	Predicted RBP	12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	PLXNA1	Q9UIW2	1896 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	WDR46	O15213	610 aa	Known RBP	12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	PQBP1	O60828	265 aa	Known RBP	12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	PGK1	P00558	417 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	AKR1B1	P15121	316 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	RAG1	P15918	1043 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	CEP85	Q6P2H3	762 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	ERC1	Q8IUD2	1116 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	ITPRIP	Q8IWB1	547 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	FTSJ3	Q8IY81	847 aa	Known RBP	12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	LCORL	Q8N3X6	602 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	SYMPK	Q92797	1274 aa	Known RBP	12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	DYNLL2	Q96FJ2	89 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	MMP19	Q99542	508 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	EXOC6B	Q9Y2D4	811 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485	ZNF532	Q9HCE3	1301 aa		12.86	□□□□□ -0.35
PFKM-223	ENST00000551485		A0A1W2PQ45	241 aa	Predicted RBP	12.85	□□□□□ -0.35
PFKM-223	ENST00000551485		A0A1W2PQY0	241 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	TCRBV5S4A2T	A0A5A2	114 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	PGK2	P07205	417 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	TAL1	P17542	331 aa	Predicted RBP	12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	DNAJB2	P25686	324 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	FPGS	Q05932	587 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	ZNF792	Q3KQV3	632 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	RIOX2	Q8IUF8	465 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	TINF2	Q9BSI4	451 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	ADAMTS5	Q9UNA0	930 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	DIS3	Q9Y2L1	958 aa	Known RBP	12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	MYO9B	Q13459	2157 aa		12.85	□□□□□ -0.35
PFKM-223	ENST00000551485	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	RLBP1	P12271	317 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	AKR1A1	P14550	325 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	KCTD2	Q14681	263 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	GRIN2C	Q14957	1233 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	USP38	Q8NB14	1042 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	LENG1	Q96BZ8	264 aa	Predicted RBP	12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	CCDC17	Q96LX7	622 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	IL1RAPL2	Q9NP60	686 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	TMEM39A	Q9NV64	488 aa		12.84	□□□□□ -0.35
PFKM-223	ENST00000551485	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	GOLIM4	O00461	696 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	VWA5A	O00534	786 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	ADAMTS4	O75173	837 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	COPB2	P35606	906 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	STAT3	P40763	770 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	FAAP100	Q0VG06	881 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	TJAP1	Q5JTD0	557 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	ANKRD33	Q7Z3H0	272 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	TOX2	Q96NM4	488 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	DNAJC2	Q99543	621 aa	Known RBP	12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	TSEN34	Q9BSV6	310 aa	Known RBP	12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	ARMT1	Q9H993	441 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	ATP8A2	Q9NTI2	1148 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	FBXO28	Q9NVF7	368 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	ZNF214	Q9UL59	606 aa	Predicted RBP	12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	PPP1R9A	Q9ULJ8	1098 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	CNPY2	Q9Y2B0	182 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	SYNRG	Q9UMZ2	1314 aa		12.83	□□□□□ -0.36
PFKM-223	ENST00000551485	NCOR1	O75376	2440 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	DCDC2C	A8MYV0	355 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	CCER2	I3L3R5	266 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	PRKAB2	O43741	272 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	CDK8	P49336	464 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	ACLY	P53396	1101 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	HSP90AB4P	Q58FF6	505 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	REPS2	Q8NFH8	660 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	RHPN1	Q8TCX5	695 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	NUP133	Q8WUM0	1156 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	TIFA	Q96CG3	184 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	STARD7	Q9NQZ5	370 aa		12.82	□□□□□ -0.36
PFKM-223	ENST00000551485	CYP2D7	A0A087X1C5	515 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	MOXD2P	A6NHM9	499 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	SMIM22	K7EJ46	135 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	MBD4	O95243	580 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	EEF2	P13639	858 aa	Known RBP	12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	FAM83B	Q5T0W9	1011 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	C12orf60	Q5U649	245 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	C16orf86	Q6ZW13	317 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	CLASRP	Q8N2M8	674 aa	Known RBP	12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	MSL3	Q8N5Y2	521 aa	Known RBP	12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	KLHDC9	Q8NEP7	349 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	ZNF576	Q9H609	170 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	KANSL2	Q9H9L4	492 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	GOPC	Q9HD26	462 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	TBX21	Q9UL17	535 aa		12.81	□□□□□ -0.36
PFKM-223	ENST00000551485	TIMP1	P01033	207 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	ADD2	P35612	726 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	KCNA10	Q16322	511 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	SLFNL1	Q499Z3	407 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	AMOTL1	Q8IY63	956 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	KIF1BP	Q96EK5	621 aa		12.8	□□□□□ -0.36

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