RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	CENPB	P07199	599 aa	Predicted RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	CCND3	P30281	292 aa	Predicted RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	MNX1	P50219	401 aa	Predicted RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	KLRC3	Q07444	240 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	TMEM132B	Q14DG7	1078 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	HABP4	Q5JVS0	413 aa	Known RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	FAM83B	Q5T0W9	1011 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	LHX8	Q68G74	356 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	ANKLE1	Q8NAG6	615 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	DIS3L	Q8TF46	1054 aa	Known RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	MKL1	Q969V6	931 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	RILPL2	Q969X0	211 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	PAWR	Q96IZ0	340 aa	Known RBP	11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	NAPB	Q9H115	298 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	MROH8	Q9H579	483 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	GOPC	Q9HD26	462 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	CLIP2	Q9UDT6	1046 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	OGDHL	Q9ULD0	1010 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	IVNS1ABP	Q9Y6Y0	642 aa		11.49	□□□□□ -0.57
PFKM-222	ENST00000551339	HIP1	O00291	1037 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	VWA5A	O00534	786 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	RAD21	O60216	631 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	COBL	O75128	1261 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	NDUFB10	O96000	172 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	SDS	P20132	328 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	ADORA2A	P29274	412 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	PDE4B	Q07343	736 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	PPARA	Q07869	468 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	PLS1	Q14651	629 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	MCMDC2	Q4G0Z9	681 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	VPS53	Q5VIR6	699 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	NECAB2	Q7Z6G3	386 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	DPP9	Q86TI2	863 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	NEDD1	Q8NHV4	660 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	CEP95	Q96GE4	821 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	MTMR4	Q9NYA4	1195 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	PPP1R9A	Q9ULJ8	1098 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	MYH8	P13535	1937 aa		11.48	□□□□□ -0.57
PFKM-222	ENST00000551339	SLC25A27	O95847	323 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	NEFL	P07196	543 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	SLC3A2	P08195	630 aa	Known RBP	11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	TFAP4	Q01664	338 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	ALX1	Q15699	326 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	FAM47A	Q5JRC9	791 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	TTC22	Q5TAA0	569 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	MFSD14C	Q5VZR4	134 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	NCAPG2	Q86XI2	1143 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	ABRA	Q8N0Z2	381 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	REPS2	Q8NFH8	660 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	FAM227B	Q96M60	508 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	NUP88	Q99567	741 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	NBPF3	Q9H094	633 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	INCENP	Q9NQS7	918 aa		11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	COLQ	Q9Y215	455 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-222	ENST00000551339	GREB1L	Q9C091	1923 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-222	ENST00000551339		A0A0D9SFI3	127 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	TTLL1	O95922	423 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	TSPY3	P0CV98	308 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	TSPY8	P0CW00	308 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	CYP2C19	P33261	490 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	STAT3	P40763	770 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	MFAP1	P55081	439 aa	Known RBP	11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	CTDSPL2	Q05D32	466 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	NMI	Q13287	307 aa	Predicted RBP	11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	OLFML2B	Q68BL8	750 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	RIOX2	Q8IUF8	465 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	PRPF38A	Q8NAV1	312 aa	Known RBP	11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	GMCL1P1	Q8NEA9	526 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	TRPV1	Q8NER1	839 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	ANAPC4	Q9UJX5	808 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	ZNF214	Q9UL59	606 aa	Predicted RBP	11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	SYNPO2	Q9UMS6	1093 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	NR2E3	Q9Y5X4	410 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339	TACC3	Q9Y6A5	838 aa		11.46	□□□□□ -0.57
PFKM-222	ENST00000551339		A0A0G2JMZ2	1700 aa		11.46	□□□□□ -0.58
PFKM-222	ENST00000551339	PLIN4	Q96Q06	1357 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	EVI5	O60447	810 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	FGA	P02671	866 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	FGR	P09769	529 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	FCER1A	P12319	257 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	GSPT1	P15170	499 aa	Known RBP	11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	ERICH6B	Q5W0A0	696 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	LRRC47	Q8N1G4	583 aa	Known RBP	11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	SLF1	Q9BQI6	1058 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	C11orf49	Q9H6J7	331 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	IL17RB	Q9NRM6	502 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	DIAPH3	Q9NSV4	1193 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	SLC5A4	Q9NY91	659 aa		11.45	□□□□□ -0.58
PFKM-222	ENST00000551339	ZMYM6	O95789	1325 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	CCDC171	Q6TFL3	1326 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	HSPD1	P10809	573 aa	Known RBP	11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	COL6A1	P12109	1028 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	SLFN13	Q68D06	897 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	MAML3	Q96JK9	1138 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	CCDC136	Q96JN2	1154 aa		11.44	□□□□□ -0.58
PFKM-222	ENST00000551339	MMP19	Q99542	508 aa		11.44	□□□□□ -0.58

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