RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, human

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPN3-208	ENST00000550974	TEX11	Q8IYF3	940 aa		14.02	□□□□□ -0.17
GPN3-208	ENST00000550974	SHCBP1	Q8NEM2	672 aa		14.02	□□□□□ -0.17
GPN3-208	ENST00000550974	TINF2	Q9BSI4	451 aa		14.02	□□□□□ -0.17
GPN3-208	ENST00000550974	GH2	P01242	217 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	FCER1A	P12319	257 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	USP14	P54578	494 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	PLS1	Q14651	629 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	TTLL4	Q14679	1199 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	ABRA	Q8N0Z2	381 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	ANKRD44	Q8N8A2	993 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	GDPD5	Q8WTR4	605 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	DHX36	Q9H2U1	1008 aa	Known RBP	14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	MROH8	Q9H579	483 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	SMCHD1	A6NHR9	2005 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	ZNF318	Q5VUA4	2279 aa		14.01	□□□□□ -0.17
GPN3-208	ENST00000550974	ROBO3	Q96MS0	1386 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	EYA2	O00167	538 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	ALDH1L1	O75891	902 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	MAP4K4	O95819	1239 aa	Predicted RBP	14	□□□□□ -0.17
GPN3-208	ENST00000550974	PGK2	P07205	417 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	C6orf222	P0C671	652 aa	Predicted RBP	14	□□□□□ -0.17
GPN3-208	ENST00000550974	ATP2B3	Q16720	1220 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	ERICH6	Q7L0X2	663 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	FOXP4	Q8IVH2	680 aa	Predicted RBP	14	□□□□□ -0.17
GPN3-208	ENST00000550974	PCSK9	Q8NBP7	692 aa	Known RBP	14	□□□□□ -0.17
GPN3-208	ENST00000550974	ZNF384	Q8TF68	577 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	ATOH1	Q92858	354 aa	Predicted RBP	14	□□□□□ -0.17
GPN3-208	ENST00000550974	SCLY	Q96I15	445 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	SRCIN1	Q9C0H9	1055 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	WNT8A	Q9H1J5	351 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	LMCD1	Q9NZU5	365 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	CNPY2	Q9Y2B0	182 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	ZDBF2	Q9HCK1	2354 aa		14	□□□□□ -0.17
GPN3-208	ENST00000550974	ZP2	Q05996	745 aa		13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	PUS10	Q3MIT2	529 aa	Known RBP	13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	UPF3B	Q9BZI7	483 aa	Known RBP	13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	KIAA1683	Q9H0B3	1180 aa		13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	MUTYH	Q9UIF7	546 aa		13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	FAM184B	Q9ULE4	1060 aa		13.99	□□□□□ -0.17
GPN3-208	ENST00000550974	SOWAHB	A6NEL2	793 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	KIF28P	B7ZC32	967 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974		H3BQ06	376 aa	Predicted RBP	13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	LDHC	P07864	332 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	RASGRF1	Q13972	1273 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	COG2	Q14746	738 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	RAB3GAP1	Q15042	981 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	CCDC102B	Q68D86	513 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	SUGP1	Q8IWZ8	645 aa	Known RBP	13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	ACER1	Q8TDN7	264 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	PBXIP1	Q96AQ6	731 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	VWCE	Q96DN2	955 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	NOC4L	Q9BVI4	516 aa	Known RBP	13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	HOXC10	Q9NYD6	342 aa		13.98	□□□□□ -0.17
GPN3-208	ENST00000550974	CST5	P28325	142 aa	Predicted RBP	13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	IRS1	P35568	1242 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	GSTO1	P78417	241 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	ASCL5	Q7RTU5	278 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	DEFB128	Q7Z7B8	93 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	METTL16	Q86W50	562 aa	Known RBP	13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	MAPKAPK5	Q8IW41	473 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	SLC9A7	Q96T83	725 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	MMP19	Q99542	508 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	PALD1	Q9ULE6	856 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	SIPA1L1	O43166	1804 aa		13.97	□□□□□ -0.17
GPN3-208	ENST00000550974	COL4A4	P53420	1690 aa	Predicted RBP	13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	C19orf67	A6NJJ6	358 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	DUSP11	O75319	330 aa	Known RBP	13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	ADORA1	P30542	326 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	GNAS	Q5JWF2	1037 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	BMP8A	Q7Z5Y6	402 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	HERC6	Q8IVU3	1022 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	PHOSPHO2	Q8TCD6	241 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	TGFBRAP1	Q8WUH2	860 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	TANGO6	Q9C0B7	1094 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	SPC25	Q9HBM1	224 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	MTUS1	Q9ULD2	1270 aa		13.96	□□□□□ -0.17
GPN3-208	ENST00000550974	TRANK1	O15050	2925 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	RGS20	O76081	388 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	PFKM	P08237	780 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	ACTN1	P12814	892 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	RALBP1	Q15311	655 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	PKN1	Q16512	942 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	ZNF792	Q3KQV3	632 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	ATG9A	Q7Z3C6	839 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	ADHFE1	Q8IWW8	467 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	NEK9	Q8TD19	979 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	NSUN4	Q96CB9	384 aa	Known RBP	13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	TRPV6	Q9H1D0	765 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	SUGCT	Q9HAC7	445 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	CEP126	Q9P2H0	1117 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	PRKAG3	Q9UGI9	489 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	SAP30BP	Q9UHR5	308 aa	Known RBP	13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	DIS3	Q9Y2L1	958 aa	Known RBP	13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	C5orf42	Q9H799	3197 aa		13.95	□□□□□ -0.18
GPN3-208	ENST00000550974	MED19	A0JLT2	244 aa	Predicted RBP	13.94	□□□□□ -0.18
GPN3-208	ENST00000550974	KCTD2	Q14681	263 aa		13.94	□□□□□ -0.18
GPN3-208	ENST00000550974	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.94	□□□□□ -0.18
GPN3-208	ENST00000550974	EP400NL	Q6ZTU2	488 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms