RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 ERVK-24P63145 666 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 SLFN13Q68D06 897 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 SIAH1Q8IUQ4 282 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 SHCBP1Q8NEM2 672 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 SOCS4Q8WXH5 440 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
PFDN5-213ENST00000550964 KDM4AO75164 1064 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 STAT2P52630 851 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 OAZ1P54368 228 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 EVX2Q03828 476 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 TRAF1Q13077 416 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 GPATCH4Q5T3I0 446 aaKnown RBP11.78□□□□□ -0.52
PFDN5-213ENST00000550964 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 ZSCAN10Q96SZ4 725 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-213ENST00000550964 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 MROH8Q9H579 483 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 KAT14Q9H8E8 782 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
PFDN5-213ENST00000550964 RLFQ13129 1914 aa11.78□□□□□ -0.52
PFDN5-213ENST00000550964 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
PFDN5-213ENST00000550964 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-213ENST00000550964 NDUFB10O96000 172 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 CYP21A2P08686 494 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 MCM5P33992 734 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-213ENST00000550964 IRF5Q13568 498 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-213ENST00000550964 TBC1D10CQ8IV04 446 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 NUDT12Q9BQG2 462 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 MCOLN1Q9GZU1 580 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 FBXO40Q9UH90 709 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 PPP1R9AQ9ULJ8 1098 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.53
PFDN5-213ENST00000550964 ADAMTS5Q9UNA0 930 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 MYH6P13533 1939 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 ZNFX1Q9P2E3 1918 aaKnown RBP11.77□□□□□ -0.53
PFDN5-213ENST00000550964 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
PFDN5-213ENST00000550964 B4E1Z4 1266 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 E7EWF7 191 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 UBXN2AP68543 259 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 PTH1RQ03431 593 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 FAM83BQ5T0W9 1011 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 IFIT1BQ5T764 474 aaKnown RBP11.76□□□□□ -0.53
PFDN5-213ENST00000550964 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 PAGR1Q9BTK6 254 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 MAF1Q9H063 256 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 LSG1Q9H089 658 aaKnown RBP11.76□□□□□ -0.53
PFDN5-213ENST00000550964 IL17RBQ9NRM6 502 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
PFDN5-213ENST00000550964 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 VWA5AO00534 786 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 ATP2A1O14983 1001 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 XRCC5P13010 732 aaKnown RBP11.75□□□□□ -0.53
PFDN5-213ENST00000550964 PSMA5P28066 241 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 NECTIN1Q15223 517 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 ASPRV1Q53RT3 343 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 LRRC47Q8N1G4 583 aaKnown RBP11.75□□□□□ -0.53
PFDN5-213ENST00000550964 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 TMEM47Q9BQJ4 181 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 NEDD4P46934 1319 aa11.75□□□□□ -0.53
PFDN5-213ENST00000550964 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 IFIT3O14879 490 aaKnown RBP11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CALM1P0DP23 149 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CALM2P0DP24 149 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CALM3P0DP25 149 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 STAT3P40763 770 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 RGS2P41220 211 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 PLS1Q14651 629 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 WTAPQ15007 396 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CCDC96Q2M329 555 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 ABHD8Q96I13 439 aa11.74□□□□□ -0.53
PFDN5-213ENST00000550964 MAP3K14Q99558 947 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms