RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PPM1BO75688 479 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 CAPNS1P04632 268 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 FAM153BP0C7A2 387 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 ZNF865P0CJ78 1059 aaPredicted RBP7.19□□□□□ -1.26
LIMA1-205ENST00000550592 PLEKHG4Q58EX7 1191 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 ADAT2Q7Z6V5 191 aaKnown RBP7.19□□□□□ -1.26
LIMA1-205ENST00000550592 TMEM151AQ8N4L1 468 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 ZBTB38Q8NAP3 1195 aaPredicted RBP7.19□□□□□ -1.26
LIMA1-205ENST00000550592 DTWD2Q8NBA8 298 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 MFSD14AQ96MC6 490 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 PRDM14Q9GZV8 571 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 KCNH3Q9ULD8 1083 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 LEMD3Q9Y2U8 911 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 A0A1W2PQU0 124 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 CBX7O95931 251 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 F13BP05160 661 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ITGA4P13612 1032 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ZNF445P59923 1031 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 NFIAQ12857 509 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 SNW1Q13573 536 aaKnown RBP7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
LIMA1-205ENST00000550592 DUSP27Q5VZP5 1158 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ZNF765Q7L2R6 523 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 HOMER1Q86YM7 354 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 ARHGEF39Q8N4T4 335 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 FBXL6Q8N531 539 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 LRRN4CLQ8ND94 238 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 BVESQ8NE79 360 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 PIWIL2Q8TC59 973 aaKnown RBP7.18□□□□□ -1.26
LIMA1-205ENST00000550592 SYTL5Q8TDW5 730 aaPredicted RBP7.18□□□□□ -1.26
LIMA1-205ENST00000550592 APPBP2Q92624 585 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 DBNDD2Q9BQY9 259 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 FANCLQ9NW38 375 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 DIS3Q9Y2L1 958 aaKnown RBP7.18□□□□□ -1.26
LIMA1-205ENST00000550592 FHOD1Q9Y613 1164 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 SBNO2Q9Y2G9 1366 aa7.18□□□□□ -1.26
LIMA1-205ENST00000550592 CECR2Q9BXF3 1484 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 PRR33A8MZF0 331 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 CLSTN1O94985 981 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 ITGAVP06756 1048 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 NOL9Q5SY16 702 aaKnown RBP7.17□□□□□ -1.26
LIMA1-205ENST00000550592 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 MRGPRX3Q96LB0 322 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 LRP2BPQ9P2M1 347 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 EMC9Q9Y3B6 208 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 PTCH2Q9Y6C5 1203 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 CAPN6Q9Y6Q1 641 aa7.17□□□□□ -1.26
LIMA1-205ENST00000550592 NOP56O00567 594 aaKnown RBP7.16□□□□□ -1.26
LIMA1-205ENST00000550592 GSC2O15499 205 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 CDC45O75419 566 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 TNK2Q07912 1038 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
LIMA1-205ENST00000550592 ZNF662Q6ZS27 426 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 SLC51AQ86UW1 340 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 ZNF227Q86WZ6 799 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 ENOX1Q8TC92 643 aaKnown RBP7.16□□□□□ -1.26
LIMA1-205ENST00000550592 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 METTL22Q9BUU2 404 aaPredicted RBP7.16□□□□□ -1.26
LIMA1-205ENST00000550592 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
LIMA1-205ENST00000550592 ARHGEF4Q9NR80 690 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 SUGT1Q9Y2Z0 365 aa7.16□□□□□ -1.26
LIMA1-205ENST00000550592 CCDC163A0A0D9SF12 145 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 SRFP11831 508 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 OXCT1P55809 520 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 PPP2R2AP63151 447 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 DOC2BQ14184 412 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
LIMA1-205ENST00000550592 TMEM67Q5HYA8 995 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 POMZP3Q6PJE2 187 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 C16orf86Q6ZW13 317 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 TMC3Q7Z5M5 1100 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 SYNPOQ8N3V7 929 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 MFSD4AQ8N468 514 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 BRF1Q92994 677 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 PPP1R14AQ96A00 147 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 GPR62Q9BZJ7 368 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 GFOD1Q9NXC2 390 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
LIMA1-205ENST00000550592 AKT3Q9Y243 479 aa7.15□□□□□ -1.26
LIMA1-205ENST00000550592 TRAV20A0A0B4J274 112 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 GNAT3A8MTJ3 354 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 WDR64B1ANS9 1081 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 FSTP19883 344 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 NMIQ13287 307 aaPredicted RBP7.14□□□□□ -1.27
LIMA1-205ENST00000550592 NKAPLQ5M9Q1 402 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 KIAA0907Q7Z7F0 614 aaPredicted RBP7.14□□□□□ -1.27
LIMA1-205ENST00000550592 TRIM59Q8IWR1 403 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 CRACR2BQ8N4Y2 399 aaPredicted RBP7.14□□□□□ -1.27
LIMA1-205ENST00000550592 FIBCD1Q8N539 461 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 ADCY4Q8NFM4 1077 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 SHKBP1Q8TBC3 707 aa7.14□□□□□ -1.27
LIMA1-205ENST00000550592 AARSD1Q9BTE6 412 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms