RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	CACNB1	Q02641	598 aa	Predicted RBP	13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	LBX2	Q6XYB7	198 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	MFSD6	Q6ZSS7	791 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	REPS2	Q8NFH8	660 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	RUFY2	Q8WXA3	655 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	TMEM47	Q9BQJ4	181 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZSWIM5	Q9P217	1185 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	STX8	Q9UNK0	236 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	MTMR7	Q9Y216	660 aa		13.27	□□□□□ -0.29
RAB5B-208	ENST00000550283	WDR46	O15213	610 aa	Known RBP	13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	FLOT1	O75955	427 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	GCLC	P48506	637 aa	Predicted RBP	13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	SNAP25	P60880	206 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	DOCK3	Q8IZD9	2030 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	SH3TC2	Q8TF17	1288 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	LPAR1	Q92633	364 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZNF287	Q9HBT7	754 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	GPHN	Q9NQX3	736 aa	Predicted RBP	13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	SRRD	Q9UH36	339 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283	GJD2	Q9UKL4	321 aa		13.26	□□□□□ -0.29
RAB5B-208	ENST00000550283		E7EWF7	191 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	SLC27A2	O14975	620 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	CDC45	O75419	566 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	MCC	P23508	829 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	ANTXR2	P58335	489 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	COG2	Q14746	738 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	TMEM132B	Q14DG7	1078 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	IMMT	Q16891	758 aa	Known RBP	13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	SLFN13	Q68D06	897 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	TTBK2	Q6IQ55	1244 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	KCTD1	Q719H9	257 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	CHST3	Q7LGC8	479 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	GMCL1P1	Q8NEA9	526 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	GPRC5A	Q8NFJ5	357 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	GOPC	Q9HD26	462 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	TCP11L1	Q9NUJ3	509 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	ADAMTS5	Q9UNA0	930 aa		13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	COL11A1	P12107	1806 aa	Predicted RBP	13.25	□□□□□ -0.29
RAB5B-208	ENST00000550283	MYPN	Q86TC9	1320 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	MYC	P01106	439 aa	Predicted RBP	13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	ELN	P15502	786 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	FLT3LG	P49771	235 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	FCGRT	P55899	365 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	TRIM32	Q13049	653 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	NECTIN1	Q15223	517 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	RASEF	Q8IZ41	740 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	ENAH	Q8N8S7	591 aa	Predicted RBP	13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	CPVL	Q9H3G5	476 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	SH2D4A	Q9H788	454 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	ANO2	Q9NQ90	1003 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	CTNNA3	Q9UI47	895 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	PPP1R9A	Q9ULJ8	1098 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	RABGAP1	Q9Y3P9	1069 aa		13.24	□□□□□ -0.29
RAB5B-208	ENST00000550283	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	VWA5A	O00534	786 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	TNPO2	O14787	897 aa	Known RBP	13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	SEC23A	Q15436	765 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	CREB3L3	Q68CJ9	461 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	ESR2	Q92731	530 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	USP6NL	Q92738	828 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZNF214	Q9UL59	606 aa	Predicted RBP	13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	RIPK3	Q9Y572	518 aa		13.23	□□□□□ -0.29
RAB5B-208	ENST00000550283	TNKS	O95271	1327 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	TMEM232	C9JQI7	657 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	BMP3	P12645	472 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	SLC16A2	P36021	539 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	SOX10	P56693	466 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	KIF22	Q14807	665 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	MTFR1	Q15390	333 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	PKN2	Q16513	984 aa	Known RBP	13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	CCL14	Q16627	93 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	SLC35G1	Q2M3R5	365 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	MORN1	Q5T089	497 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	GPR142	Q7Z601	462 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	KIFC2	Q96AC6	838 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	GMCL1	Q96IK5	515 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	SLF1	Q9BQI6	1058 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	SPATC1L	Q9H0A9	340 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	RNF41	Q9H4P4	317 aa	Predicted RBP	13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	GPCPD1	Q9NPB8	672 aa		13.22	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZNF536	O15090	1300 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	POTEF	A5A3E0	1075 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	GOLGA8H	P0CJ92	632 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	PDHB	P11177	359 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	TOP1	P11387	765 aa	Known RBP	13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	PC	P11498	1178 aa	Known RBP	13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	ERCC3	P19447	782 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	ADCK5	Q3MIX3	580 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	ANKS1A	Q92625	1134 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	ARMC5	Q96C12	935 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	ZNF333	Q96JL9	665 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	HOXC10	Q9NYD6	342 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	FLRT1	Q9NZU1	646 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	SYNPO2	Q9UMS6	1093 aa		13.21	□□□□□ -0.29
RAB5B-208	ENST00000550283	SNHG28	P0DPA3	235 aa		13.2	□□□□□ -0.3

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