RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 PRKCZQ05513 592 aa30.59■■■□□ 2.49
CPSF6-205ENST00000550075 SLFN13Q68D06 897 aa30.59■■■□□ 2.49
CPSF6-205ENST00000550075 IQCA1Q86XH1 822 aa30.59■■■□□ 2.49
CPSF6-205ENST00000550075 NOVP48745 357 aa30.58■■■□□ 2.49
CPSF6-205ENST00000550075 TRDNQ13061 729 aa30.58■■■□□ 2.49
CPSF6-205ENST00000550075 NBPF11Q86T75 865 aa30.58■■■□□ 2.49
CPSF6-205ENST00000550075 ATG4CQ96DT6 458 aa30.58■■■□□ 2.49
CPSF6-205ENST00000550075 NUP88Q99567 741 aaPredicted RBP30.58■■■□□ 2.49
CPSF6-205ENST00000550075 PPP1R9AQ9ULJ8 1098 aa30.58■■■□□ 2.49
CPSF6-205ENST00000550075 ISY1Q9ULR0 285 aaKnown RBP30.58■■■□□ 2.49
CPSF6-205ENST00000550075 KDM4AO75164 1064 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 CNMDO75829 334 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 TOP1P11387 765 aaKnown RBP30.57■■■□□ 2.48
CPSF6-205ENST00000550075 MAP4K1Q92918 833 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 GMCL1Q96IK5 515 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 TTC14Q96N46 770 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 SLF1Q9BQI6 1058 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 BTBD7Q9P203 1132 aa30.57■■■□□ 2.48
CPSF6-205ENST00000550075 B4E1Z4 1266 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 PEX10O60683 326 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 BMP3P12645 472 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 POTEEQ6S8J3 1075 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 SOCS4Q8WXH5 440 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 ANO2Q9NQ90 1003 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 FBXO28Q9NVF7 368 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 FEM1BQ9UK73 627 aa30.56■■■□□ 2.48
CPSF6-205ENST00000550075 RBM8AQ9Y5S9 174 aaKnown RBP30.56■■■□□ 2.48
CPSF6-205ENST00000550075 CYP21A2P08686 494 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 SLC1A4P43007 532 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 FLT3LGP49771 235 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 Q3C1V9 767 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 ARMC5Q96C12 935 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 PORCNQ9H237 461 aa30.55■■■□□ 2.48
CPSF6-205ENST00000550075 DOCK3Q8IZD9 2030 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 IRF5Q13568 498 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 WDR78Q5VTH9 848 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 SLAIN1Q8ND83 568 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 SPATC1LQ9H0A9 340 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 GABRQQ9UN88 632 aa30.54■■■□□ 2.48
CPSF6-205ENST00000550075 GRK4P32298 578 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 PLS1Q14651 629 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 PLEKHH3Q7Z736 793 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 RALYLQ86SE5 291 aaKnown RBP30.53■■■□□ 2.48
CPSF6-205ENST00000550075 PRPF38AQ8NAV1 312 aaKnown RBP30.53■■■□□ 2.48
CPSF6-205ENST00000550075 UBAC1Q9BSL1 405 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 LSG1Q9H089 658 aaKnown RBP30.53■■■□□ 2.48
CPSF6-205ENST00000550075 CTDP1Q9Y5B0 961 aaPredicted RBP30.53■■■□□ 2.48
CPSF6-205ENST00000550075 IVNS1ABPQ9Y6Y0 642 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 HTTP42858 3142 aa30.53■■■□□ 2.48
CPSF6-205ENST00000550075 COL11A1P12107 1806 aaPredicted RBP30.52■■■□□ 2.48
CPSF6-205ENST00000550075 IKQ13123 557 aaPredicted RBP30.52■■■□□ 2.48
CPSF6-205ENST00000550075 GPR142Q7Z601 462 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 FAM160B2Q86V87 743 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 DGKHQ86XP1 1220 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 SHCBP1Q8NEM2 672 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 DCAF4Q8WV16 495 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 NUDT12Q9BQG2 462 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 TMEM47Q9BQJ4 181 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 ADAMTS5Q9UNA0 930 aa30.52■■■□□ 2.48
CPSF6-205ENST00000550075 VWA5AO00534 786 aa30.51■■■□□ 2.47
CPSF6-205ENST00000550075 MCCP23508 829 aa30.51■■■□□ 2.47
CPSF6-205ENST00000550075 STAT2P52630 851 aa30.51■■■□□ 2.47
CPSF6-205ENST00000550075 CHURC1Q8WUH1 139 aa30.51■■■□□ 2.47
CPSF6-205ENST00000550075 MOV10L1Q9BXT6 1211 aaKnown RBP30.51■■■□□ 2.47
CPSF6-205ENST00000550075 ADCY3O60266 1144 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 FDX1P10109 184 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 COPB2P35606 906 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 CCDC96Q2M329 555 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 KIFC2Q96AC6 838 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 ZSCAN10Q96SZ4 725 aaPredicted RBP30.5■■■□□ 2.47
CPSF6-205ENST00000550075 ZKSCAN3Q9BRR0 538 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 ZSWIM5Q9P217 1185 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 MTMR7Q9Y216 660 aa30.5■■■□□ 2.47
CPSF6-205ENST00000550075 TMEM232C9JQI7 657 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 ZBED4O75132 1171 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 SLC25A27O95847 323 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 RCSD1Q6JBY9 416 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 NCOA7Q8NI08 942 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 PXYLP1Q8TE99 480 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 SH3TC2Q8TF17 1288 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 ZNF333Q96JL9 665 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 MROH8Q9H579 483 aa30.49■■■□□ 2.47
CPSF6-205ENST00000550075 BIN2Q9UBW5 565 aaPredicted RBP30.49■■■□□ 2.47
CPSF6-205ENST00000550075 PLXNB2O15031 1838 aa30.48■■■□□ 2.47
CPSF6-205ENST00000550075 E7EWF7 191 aa30.48■■■□□ 2.47
CPSF6-205ENST00000550075 TMEM132BQ14DG7 1078 aa30.48■■■□□ 2.47
CPSF6-205ENST00000550075 KAT14Q9H8E8 782 aa30.48■■■□□ 2.47
CPSF6-205ENST00000550075 GJD2Q9UKL4 321 aa30.48■■■□□ 2.47
CPSF6-205ENST00000550075 TNKSO95271 1327 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 PLA2G6O60733 806 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 RGS2P41220 211 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 UBXN2AP68543 259 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 RNF20Q5VTR2 975 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 NCAPG2Q86XI2 1143 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 NKX2-3Q8TAU0 364 aa30.47■■■□□ 2.47
CPSF6-205ENST00000550075 ZNF236Q9UL36 1845 aa30.46■■■□□ 2.47
CPSF6-205ENST00000550075 SLC15A5A6NIM6 579 aa30.46■■■□□ 2.47
CPSF6-205ENST00000550075 ERCC3P19447 782 aa30.46■■■□□ 2.47
CPSF6-205ENST00000550075 KCTD1Q719H9 257 aa30.46■■■□□ 2.47
CPSF6-205ENST00000550075 RIOX2Q8IUF8 465 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms