RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 BMP3P12645 472 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 PSMC4P43686 418 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 CAP1Q01518 475 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 OTOP1Q7RTM1 612 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 ENAHQ8N8S7 591 aaPredicted RBP22.76■■□□□ 1.23
DDX54-207ENST00000550016 PAGR1Q9BTK6 254 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 ARHGAP39Q9C0H5 1083 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 FBXO28Q9NVF7 368 aa22.76■■□□□ 1.23
DDX54-207ENST00000550016 GNRH1P01148 92 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 MCCP23508 829 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 SLC1A4P43007 532 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 ERVK-9P63128 1117 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 ERVK-24P63145 666 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 PKN2Q16513 984 aaKnown RBP22.75■■□□□ 1.23
DDX54-207ENST00000550016 MB21D1Q8N884 522 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 FEM1BQ9UK73 627 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 TRIM17Q9Y577 477 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 TNKSO95271 1327 aa22.75■■□□□ 1.23
DDX54-207ENST00000550016 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
DDX54-207ENST00000550016 PEX10O60683 326 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 CNMDO75829 334 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 FMNL1O95466 1100 aaPredicted RBP22.74■■□□□ 1.23
DDX54-207ENST00000550016 CTGFP29279 349 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 FCGRTP55899 365 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 Q3C1V9 767 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 TSGA10IPQ3SY00 556 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 SAMD1Q6SPF0 538 aaPredicted RBP22.74■■□□□ 1.23
DDX54-207ENST00000550016 DCAF4Q8WV16 495 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 ATG4CQ96DT6 458 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 TRIM47Q96LD4 638 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 PPP1R9AQ9ULJ8 1098 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 ADAMTS5Q9UNA0 930 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 MTMR7Q9Y216 660 aa22.74■■□□□ 1.23
DDX54-207ENST00000550016 ECM2O94769 699 aaPredicted RBP22.73■■□□□ 1.23
DDX54-207ENST00000550016 ZKSCAN1P17029 563 aaPredicted RBP22.73■■□□□ 1.23
DDX54-207ENST00000550016 SEC23AQ15436 765 aa22.73■■□□□ 1.23
DDX54-207ENST00000550016 MB21D2Q8IYB1 491 aaPredicted RBP22.73■■□□□ 1.23
DDX54-207ENST00000550016 PRPF38AQ8NAV1 312 aaKnown RBP22.73■■□□□ 1.23
DDX54-207ENST00000550016 CHMP4CQ96CF2 233 aa22.73■■□□□ 1.23
DDX54-207ENST00000550016 SLF1Q9BQI6 1058 aa22.73■■□□□ 1.23
DDX54-207ENST00000550016 KAT14Q9H8E8 782 aa22.73■■□□□ 1.23
DDX54-207ENST00000550016 BTBD7Q9P203 1132 aa22.73■■□□□ 1.23
DDX54-207ENST00000550016 ZNFX1Q9P2E3 1918 aaKnown RBP22.72■■□□□ 1.23
DDX54-207ENST00000550016 HOXD10P28358 340 aa22.72■■□□□ 1.23
DDX54-207ENST00000550016 SART3Q15020 963 aaKnown RBP22.72■■□□□ 1.23
DDX54-207ENST00000550016 CHURC1Q8WUH1 139 aa22.72■■□□□ 1.23
DDX54-207ENST00000550016 KCNB2Q92953 911 aa22.72■■□□□ 1.23
DDX54-207ENST00000550016 MCOLN1Q9GZU1 580 aa22.72■■□□□ 1.23
DDX54-207ENST00000550016 ISY1Q9ULR0 285 aaKnown RBP22.72■■□□□ 1.23
DDX54-207ENST00000550016 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
DDX54-207ENST00000550016 ERICH2A1L162 156 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 TMEM232C9JQI7 657 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
DDX54-207ENST00000550016 PLA2G6O60733 806 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 MCM5P33992 734 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 HSPA4P34932 840 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 ANTXR2P58335 489 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 CCNA1P78396 465 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 IFIT1BQ5T764 474 aaKnown RBP22.71■■□□□ 1.23
DDX54-207ENST00000550016 KCTD1Q719H9 257 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 CHST3Q7LGC8 479 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 FAM160B2Q86V87 743 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 RASEFQ8IZ41 740 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 PNMA1Q8ND90 353 aa22.71■■□□□ 1.23
DDX54-207ENST00000550016 VWA5AO00534 786 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 TNPO2O14787 897 aaKnown RBP22.7■■□□□ 1.22
DDX54-207ENST00000550016 STAT2P52630 851 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 PRMT2P55345 433 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 KRT32Q14532 448 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 CCDC96Q2M329 555 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 FBXO46Q6PJ61 603 aaPredicted RBP22.7■■□□□ 1.22
DDX54-207ENST00000550016 CCAR1Q8IX12 1150 aaKnown RBP22.7■■□□□ 1.22
DDX54-207ENST00000550016 KIFC2Q96AC6 838 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 MTA3Q9BTC8 594 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 USP26Q9BXU7 913 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 PLXNB2O15031 1838 aa22.7■■□□□ 1.22
DDX54-207ENST00000550016 SNHG28P0DPA3 235 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 PDHBP11177 359 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 MAPK4P31152 587 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 IKQ13123 557 aaPredicted RBP22.69■■□□□ 1.22
DDX54-207ENST00000550016 TMEM67Q5HYA8 995 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 RASGRP2Q7LDG7 609 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 IGDCC4Q8TDY8 1250 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 COA7Q96BR5 231 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 NEK1Q96PY6 1258 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 SPATC1LQ9H0A9 340 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 SRRDQ9UH36 339 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 PTPN22Q9Y2R2 807 aa22.69■■□□□ 1.22
DDX54-207ENST00000550016 PRC1O43663 620 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 EIF5BO60841 1220 aaKnown RBP22.68■■□□□ 1.22
DDX54-207ENST00000550016 ZBED4O75132 1171 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 FDX1P10109 184 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 PLS1Q14651 629 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 TMEM132BQ14DG7 1078 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 WTAPQ15007 396 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 PORCNQ9H237 461 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 MYH6P13533 1939 aa22.68■■□□□ 1.22
DDX54-207ENST00000550016 ZNF543Q08ER8 600 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 ADCK5Q3MIX3 580 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms