RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 MAGEB6Q8N7X4 407 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 CDK5RAP2Q96SN8 1893 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 FLOT1O75955 427 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 ACLYP53396 1101 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 OS9Q13438 667 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 ADGRE1Q14246 886 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 CERS3Q8IU89 383 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 GPR108Q9NPR9 543 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 STARD7Q9NQZ5 370 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
TRAFD1-206ENST00000549358 AKR1A1P14550 325 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 MMP19Q99542 508 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
TRAFD1-206ENST00000549358 ADAMTS4O75173 837 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 SLC25A27O95847 323 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 CT47B1P0C2W7 299 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 ACRP10323 421 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 CSF2RAP15509 400 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 KCTD2Q14681 263 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 CCDC174Q6PII3 467 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 TBX21Q9UL17 535 aa13.13□□□□□ -0.31
TRAFD1-206ENST00000549358 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 GABPAQ06546 454 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 KCNA10Q16322 511 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 ZNF792Q3KQV3 632 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 RASIP1Q5U651 963 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 DBNLQ9UJU6 430 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
TRAFD1-206ENST00000549358 MOXD2PA6NHM9 499 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 C1QTNF1Q9BXJ1 281 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
TRAFD1-206ENST00000549358 MYH1P12882 1939 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 MAGEB6P1A0A0J9YX57 407 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 APBB1O00213 710 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 BMP1P13497 986 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 STAT3P40763 770 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 CDK7P50613 346 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 RAB30Q15771 203 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 ADAMTS5Q9UNA0 930 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
TRAFD1-206ENST00000549358 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 BCAR3O75815 825 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 CYP2D6P10635 497 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 TFF2Q03403 129 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 PSRC1Q6PGN9 363 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
TRAFD1-206ENST00000549358 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms