RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 KDM3AQ9Y4C1 1321 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
VDR-206ENST00000549336 CHMP2AO43633 222 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 ZNF609O15014 1411 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
VDR-206ENST00000549336 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
VDR-206ENST00000549336 MYOZ2Q9NPC6 264 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 ZNF70Q9UC06 446 aaPredicted RBP13.14□□□□□ -0.31
VDR-206ENST00000549336 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 PPP4CP60510 307 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 SPC24Q8NBT2 197 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 EXOC7Q9UPT5 735 aa13.14□□□□□ -0.31
VDR-206ENST00000549336 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
VDR-206ENST00000549336 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
VDR-206ENST00000549336 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
VDR-206ENST00000549336 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
VDR-206ENST00000549336 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 GLG1Q92896 1179 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 LAD1O00515 517 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 PSMD1Q99460 953 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
VDR-206ENST00000549336 M0QZ92 97 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 KIF4AO95239 1232 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 TM4SF1P30408 202 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 MIER3Q7Z3K6 550 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
VDR-206ENST00000549336 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 ATRNO75882 1429 aa13.13□□□□□ -0.31
VDR-206ENST00000549336 CETN2P41208 172 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 CASP7P55210 303 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 SPA17Q15506 151 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 PHACTR2O75167 634 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 SEPT2Q15019 361 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
VDR-206ENST00000549336 GGA3Q9NZ52 723 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 CYP2D6P10635 497 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 SCRN1Q12765 414 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 MNS1Q8NEH6 495 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 SLF1Q9BQI6 1058 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 TEKT3Q9BXF9 490 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 SPP2Q13103 211 aa13.12□□□□□ -0.31
VDR-206ENST00000549336 ANGEL2Q5VTE6 544 aaKnown RBP13.12□□□□□ -0.31
VDR-206ENST00000549336 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
VDR-206ENST00000549336 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 N4BP3O15049 544 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 FGFR2P21802 821 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 PRR16Q569H4 304 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
VDR-206ENST00000549336 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 FLT1P17948 1338 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 OR52Z1P0C646 297 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
VDR-206ENST00000549336 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
VDR-206ENST00000549336 PRPF38AQ8NAV1 312 aaKnown RBP13.11□□□□□ -0.31
VDR-206ENST00000549336 LPAR1Q92633 364 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 IL1R1P14778 569 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 STRN3Q13033 797 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 INF2Q27J81 1249 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 CABP7Q86V35 215 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 PIGSQ96S52 555 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
VDR-206ENST00000549336 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 PAF1Q8N7H5 531 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
VDR-206ENST00000549336 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 H0YCG3 227 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
VDR-206ENST00000549336 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms