RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SHISA4Q96DD7 197 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 G6PC3Q9BUM1 346 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 RAPGEFL1Q9UHV5 662 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 ZMYM5Q9UJ78 669 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 ZNF281Q9Y2X9 895 aa7.35□□□□□ -1.23
CNOT2-216ENST00000548939 ROBO2Q9HCK4 1378 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 TEX51A0A1B0GUA7 166 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 UBOX5O94941 541 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 INHBBP09529 407 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 FBXL19Q6PCT2 694 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 ERMP1Q7Z2K6 904 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 WAPLQ7Z5K2 1190 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 USHBP1Q8N6Y0 703 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 DAGLBQ8NCG7 672 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
CNOT2-216ENST00000548939 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 COPRSQ9NQ92 184 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 GMIPQ9P107 970 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 PCDHB14Q9Y5E9 798 aa7.34□□□□□ -1.23
CNOT2-216ENST00000548939 SSU72P8A0A1W2PR75 194 aa7.33□□□□□ -1.24
CNOT2-216ENST00000548939 SIRT2Q8IXJ6 389 aa7.33□□□□□ -1.24
CNOT2-216ENST00000548939 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
CNOT2-216ENST00000548939 LRRC3Q9BY71 257 aa7.33□□□□□ -1.24
CNOT2-216ENST00000548939 FOXP3Q9BZS1 431 aa7.33□□□□□ -1.24
CNOT2-216ENST00000548939 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
CNOT2-216ENST00000548939 OR14I1A6ND48 311 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 NOTOA8MTQ0 251 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 USP2O75604 605 aaPredicted RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 ERCC3P19447 782 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 EIF4A3P38919 411 aaKnown RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 PCBP3P57721 371 aaKnown RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 SLC14A2Q15849 920 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 TMC3Q7Z5M5 1100 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 NLRX1Q86UT6 975 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 ZNF655Q8N720 491 aaPredicted RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 SGPP1Q9BX95 441 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 KCNQ5Q9NR82 932 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 TCFL5Q9UL49 500 aa7.32□□□□□ -1.24
CNOT2-216ENST00000548939 CNOT6Q9ULM6 557 aaKnown RBP7.32□□□□□ -1.24
CNOT2-216ENST00000548939 ATE1O95260 518 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 ADGRF1Q5T601 910 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 GCM1Q9NP62 436 aa7.31□□□□□ -1.24
CNOT2-216ENST00000548939 GREM1O60565 184 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 FKTNO75072 461 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 SYPP08247 313 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
CNOT2-216ENST00000548939 KIR2DL1P43626 348 aaPredicted RBP7.3□□□□□ -1.24
CNOT2-216ENST00000548939 KIR2DL2P43627 348 aaPredicted RBP7.3□□□□□ -1.24
CNOT2-216ENST00000548939 OVOS1Q6IE37 1185 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 CEP128Q6ZU80 1094 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
CNOT2-216ENST00000548939 TMEM82A0PJX8 343 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 NRDCO43847 1150 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 EFEMP2O95967 443 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 SNW1Q13573 536 aaKnown RBP7.29□□□□□ -1.24
CNOT2-216ENST00000548939 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 ZNF385BQ569K4 471 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
CNOT2-216ENST00000548939 CNNM2Q9H8M5 875 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 EHMT1Q9H9B1 1298 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 CRTAC1Q9NQ79 661 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 KCTD3Q9Y597 815 aa7.29□□□□□ -1.24
CNOT2-216ENST00000548939 B8ZZF3 427 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 RFXAPO00287 272 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 PRRG2O14669 202 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 CLEC3AO75596 197 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 PRAMEF1O95521 474 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 CRKP46108 304 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 CTSWP56202 376 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 ATG4CQ96DT6 458 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 GGT7Q9UJ14 662 aa7.28□□□□□ -1.24
CNOT2-216ENST00000548939 NCANO14594 1321 aa7.27□□□□□ -1.24
CNOT2-216ENST00000548939 SIGLEC6O43699 453 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 HOXA5P20719 270 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 SRSF3P84103 164 aaKnown RBP7.27□□□□□ -1.25
CNOT2-216ENST00000548939 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 SEZ6Q53EL9 994 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 TCERG1LQ5VWI1 586 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 ZPBP2Q6X784 338 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 NLRC3Q7RTR2 1065 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 ZNF512BQ96KM6 892 aaPredicted RBP7.27□□□□□ -1.25
CNOT2-216ENST00000548939 KRTAP4-2Q9BYR5 136 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 PRDM14Q9GZV8 571 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 PARD6AQ9NPB6 346 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 SIRT5Q9NXA8 310 aa7.27□□□□□ -1.25
CNOT2-216ENST00000548939 HRKO00198 91 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 BMP7P18075 431 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 MCM4P33991 863 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 CCNFP41002 786 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 RTP1P59025 263 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 CLCQ05315 142 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 GK5Q6ZS86 529 aa7.26□□□□□ -1.25
CNOT2-216ENST00000548939 HS2ST1Q7LGA3 356 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms