RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-205ENST00000548086 F5H6K3 240 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-205ENST00000548086 NDUFB10O96000 172 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 CALM1P0DP23 149 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 CALM2P0DP24 149 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 CALM3P0DP25 149 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
SCN8A-205ENST00000548086 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 KLRC3Q07444 240 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
SCN8A-205ENST00000548086 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 FEZ1Q99689 392 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
SCN8A-205ENST00000548086 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 PRPF40AO75400 957 aaKnown RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 MBD3O95983 291 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 IREB2P48200 963 aaKnown RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 FUT2Q10981 343 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SPP2Q13103 211 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 MTMR2Q13614 643 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SLFN13Q68D06 897 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 TMTC3Q6ZXV5 915 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 TMEM63CQ9P1W3 806 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 TMX2Q9Y320 296 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 PALM3A6NDB9 673 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 CYTH3O43739 400 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 PARP1P09874 1014 aaKnown RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 SLC16A2P36021 539 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 RCAN1P53805 252 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 NOL9Q5SY16 702 aaKnown RBP12.81□□□□□ -0.36
SCN8A-205ENST00000548086 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 CSADQ9Y600 493 aa12.81□□□□□ -0.36
SCN8A-205ENST00000548086 CNTNAP5Q8WYK1 1306 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 KLRF2D3W0D1 207 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 DHX16O60231 1041 aaKnown RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 SLC1A4P43007 532 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 CST9Q5W186 159 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 MYH6P13533 1939 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 IFNAR1P17181 557 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 KIF5BP33176 963 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 ARMC9Q7Z3E5 817 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 ANKRD13AQ8IZ07 590 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 GMCL1P1Q8NEA9 526 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 VCPKMTQ9H867 229 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
SCN8A-205ENST00000548086 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
SCN8A-205ENST00000548086 YY1P25490 414 aa12.79□□□□□ -0.36
SCN8A-205ENST00000548086 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
SCN8A-205ENST00000548086 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
SCN8A-205ENST00000548086 ZNF280CQ8ND82 737 aa12.79□□□□□ -0.36
SCN8A-205ENST00000548086 MAP3K14Q99558 947 aa12.79□□□□□ -0.36
SCN8A-205ENST00000548086 GBA2Q9HCG7 927 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-205ENST00000548086 V9GY48 417 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-205ENST00000548086 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-205ENST00000548086 HMGCS2P54868 508 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
SCN8A-205ENST00000548086 ASPRV1Q53RT3 343 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
SCN8A-205ENST00000548086 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-205ENST00000548086 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 KIAA1683Q9H0B3 1180 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 EMILIN3Q9NT22 766 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 PTPRFP10586 1907 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 IRF6O14896 467 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 CDKL5O76039 1030 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms