RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 ADCK5Q3MIX3 580 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 PLXNA1Q9UIW2 1896 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 SMCHD1A6NHR9 2005 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 GPR25O00155 361 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 FLOT1O75955 427 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 SEC24BO95487 1268 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 PSMA5P28066 241 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 SLC1A4P43007 532 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 ANAPC15P60006 121 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 CHST3Q7LGC8 479 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 HOXC10Q9NYD6 342 aa13.34□□□□□ -0.27
CALCOCO1-208ENST00000547988 BAZ2BQ9UIF8 2168 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 PDHBP11177 359 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 BCRP11274 1271 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 LBX1P52954 281 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 TM6SF1Q9BZW5 370 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 CPA4Q9UI42 421 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZNF236Q9UL36 1845 aa13.33□□□□□ -0.28
CALCOCO1-208ENST00000547988 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 PLA2G6O60733 806 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 FKTNO75072 461 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 DSG3P32926 999 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 LIFRP42702 1097 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 STAT2P52630 851 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 SP3Q02447 781 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 GPATCH4Q5T3I0 446 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 CHURC1Q8WUH1 139 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 ADAMTS5Q9UNA0 930 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
CALCOCO1-208ENST00000547988 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 LACTBP83111 547 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZNF543Q08ER8 600 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 ASPRV1Q53RT3 343 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
CALCOCO1-208ENST00000547988 CCDC69A6NI79 296 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 FDX1P10109 184 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 ERVK-24P63145 666 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 IKQ13123 557 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 KIF22Q14807 665 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 BTNL9Q6UXG8 535 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 FBXL16Q8N461 479 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 GPRC5AQ8NFJ5 357 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 PAGR1Q9BTK6 254 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 RBPJLQ9UBG7 517 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
CALCOCO1-208ENST00000547988 VWA5AO00534 786 aa13.29□□□□□ -0.28
CALCOCO1-208ENST00000547988 CNMDO75829 334 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms