RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 BPNT1O95861 308 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 PNLIPP16233 465 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 TNNI2P48788 182 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 EFEMP1Q12805 493 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 CNKSR3Q6P9H4 555 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 C14orf37Q86TY3 774 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 C1orf115Q9H7X2 142 aa4.57□□□□□ -1.68
DEPDC4-204ENST00000547823 NCAPD3P42695 1498 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 PLCG1P19174 1290 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 GNA15P30679 374 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 ARL4AP40617 200 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 ERVFRD-1P60508 538 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 RNF4P78317 190 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 ZXDCQ2QGD7 858 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 CYB5RLQ6IPT4 315 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 LINC01356Q8N9X3 169 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 SYTL5Q8TDW5 730 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 MZB1Q8WU39 189 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 MAP6Q96JE9 813 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 KREMEN1Q96MU8 473 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 G6PC3Q9BUM1 346 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 TMPRSS5Q9H3S3 457 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 ZMYM5Q9UJ78 669 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 PALD1Q9ULE6 856 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 PCDHB5Q9Y5E4 795 aa4.56□□□□□ -1.68
DEPDC4-204ENST00000547823 SSU72P8A0A1W2PR75 194 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 CILPO75339 1184 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 MPOP05164 745 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 VIPR1P32241 457 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 PCBP3P57721 371 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 KRTAP10-2P60368 255 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 LAPTM5Q13571 262 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 GGNQ86UU5 652 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 NLGN1Q8N2Q7 840 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 DAGLBQ8NCG7 672 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 FEZF2Q8TBJ5 459 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 CCDC74BQ96LY2 380 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 CNTD2Q9H8S5 307 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 MYRFQ9Y2G1 1151 aa4.55□□□□□ -1.68
DEPDC4-204ENST00000547823 USP2O75604 605 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 LDHBP07195 334 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 RPL10P27635 214 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 EPHB3P54753 998 aa4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 NMIQ13287 307 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 GALNT18Q6P9A2 607 aa4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 CEP128Q6ZU80 1094 aa4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 WAPLQ7Z5K2 1190 aa4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 FAM129CQ86XR2 697 aa4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 ZNF655Q8N720 491 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 NOC4LQ9BVI4 516 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-204ENST00000547823 DISP3Q9P2K9 1392 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 LAMC3Q9Y6N6 1575 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 PRR36Q9H6K5 1346 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 NOTOA8MTQ0 251 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 BRD1O95696 1058 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 PLP2Q04941 152 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 MLECQ14165 292 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 PANK1Q8TE04 598 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 TNFRSF10DQ9UBN6 386 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 EBF1Q9UH73 591 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 WWC3Q9ULE0 1092 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 TAF6LQ9Y6J9 622 aa4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 ZCCHC6Q5VYS8 1495 aaKnown RBP4.53□□□□□ -1.68
DEPDC4-204ENST00000547823 ARHGEF11O15085 1522 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 SHISA3A0PJX4 238 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 WTIPA6NIX2 430 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 PRPF40AO75400 957 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 TFE3P19532 575 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 CDR1P51861 262 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 ZFYVE27Q5T4F4 411 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 SIRT2Q8IXJ6 389 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 RETREG2Q8NC44 543 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 LINC00116Q8NCU8 138 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 FCRL2Q96LA5 508 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 SETDB2Q96T68 719 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 HDAC8Q9BY41 377 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 EPB41L4AQ9HCS5 686 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 TIMELESSQ9UNS1 1208 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 AK5Q9Y6K8 562 aa4.52□□□□□ -1.69
DEPDC4-204ENST00000547823 LRRN2O75325 713 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 ST13P50502 369 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 RTP1P59025 263 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 ZNF827Q17R98 1081 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 LDHDQ86WU2 507 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 TMEFF1Q8IYR6 380 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 PHACTR4Q8IZ21 702 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 ZDHHC14Q8IZN3 488 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 EAF1Q96JC9 268 aaPredicted RBP4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 PWWP2AQ96N64 755 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 GPR20Q99678 358 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 BDH2Q9BUT1 245 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 TCFL5Q9UL49 500 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 WDR62O43379 1518 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 HMGXB3Q12766 1538 aa4.51□□□□□ -1.69
DEPDC4-204ENST00000547823 ATAD2BQ9ULI0 1458 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 PDS5BQ9NTI5 1447 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 UPK3BL1B0FP48 263 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 UPK3BL2E5RIL1 263 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 K7ESM1 405 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 P4HBP07237 508 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms