RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
CPSF6-204ENST00000547486 MROH8Q9H579 483 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 GOPCQ9HD26 462 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 ROBO3Q96MS0 1386 aa15.96■□□□□ 0.15
CPSF6-204ENST00000547486 VWA5AO00534 786 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 CNGA1P29973 690 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 ZMYM1Q5SVZ6 1142 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 NYAP2Q9P242 653 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 DDX20Q9UHI6 824 aaKnown RBP15.95■□□□□ 0.14
CPSF6-204ENST00000547486 PPP1R9AQ9ULJ8 1098 aa15.95■□□□□ 0.14
CPSF6-204ENST00000547486 ZMYND8Q9ULU4 1186 aaPredicted RBP15.95■□□□□ 0.14
CPSF6-204ENST00000547486 MYH7P12883 1935 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 F5H6K3 240 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 FOXP2O15409 715 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 CYBAP13498 195 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 SYN1P17600 705 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 KLRC3Q07444 240 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 OLFML2BQ68BL8 750 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
CPSF6-204ENST00000547486 ABRAQ8N0Z2 381 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 REPS2Q8NFH8 660 aa15.94■□□□□ 0.14
CPSF6-204ENST00000547486 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
CPSF6-204ENST00000547486 NDUFB10O96000 172 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 STAT3P40763 770 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
CPSF6-204ENST00000547486 LRRC26Q2I0M4 334 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 LRRFIP1Q32MZ4 808 aaKnown RBP15.93■□□□□ 0.14
CPSF6-204ENST00000547486 CCDC129Q6ZRS4 1044 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 RIOX2Q8IUF8 465 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 MKL1Q969V6 931 aa15.93■□□□□ 0.14
CPSF6-204ENST00000547486 ZNF214Q9UL59 606 aaPredicted RBP15.93■□□□□ 0.14
CPSF6-204ENST00000547486 SZT2Q5T011 3432 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 A0A0G2JMZ2 1700 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 SLC25A27O95847 323 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 PGK2P07205 417 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 FCER1AP12319 257 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 FAM47AQ5JRC9 791 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 CEP95Q96GE4 821 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 MAML3Q96JK9 1138 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 GDF15Q99988 308 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 INCENPQ9NQS7 918 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 MTMR4Q9NYA4 1195 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
CPSF6-204ENST00000547486 PDE1AP54750 535 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 PPARAQ07869 468 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 NEDD1Q8NHV4 660 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 MMP19Q99542 508 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
CPSF6-204ENST00000547486 NAPBQ9H115 298 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 RIPK3Q9Y572 518 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 TACC3Q9Y6A5 838 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 ALPK3Q96L96 1907 aa15.91■□□□□ 0.14
CPSF6-204ENST00000547486 MSCO60682 206 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 TFAP4Q01664 338 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 VPS53Q5VIR6 699 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
CPSF6-204ENST00000547486 ZNF287Q9HBT7 754 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 SLC5A4Q9NY91 659 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 MYH8P13535 1937 aa15.9■□□□□ 0.14
CPSF6-204ENST00000547486 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 SEPT4O43236 478 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 TTLL1O95922 423 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 BMP8BP34820 402 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 MAGEA10P43363 369 aaPredicted RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 KCTD2Q14681 263 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 GJC2Q5T442 439 aaPredicted RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 LRRC47Q8N1G4 583 aaKnown RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 EVI5LQ96CN4 794 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
CPSF6-204ENST00000547486 DNAH12Q6ZR08 3092 aa15.89■□□□□ 0.13
CPSF6-204ENST00000547486 A0A1W2PPC1 479 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 DNM1LO00429 736 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 TSPY3P0CV98 308 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 TSPY8P0CW00 308 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 TAL1P17542 331 aaPredicted RBP15.88■□□□□ 0.13
CPSF6-204ENST00000547486 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
CPSF6-204ENST00000547486 CTDSPL2Q05D32 466 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 PDE4BQ07343 736 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 GMCL1P1Q8NEA9 526 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 KIFC2Q96AC6 838 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 CHMP4CQ96CF2 233 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
CPSF6-204ENST00000547486 LAMA3Q16787 3333 aa15.88■□□□□ 0.13
CPSF6-204ENST00000547486 ZNF236Q9UL36 1845 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 IGHDP01880 384 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
CPSF6-204ENST00000547486 SLC4A3P48751 1232 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms