RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TANGO6Q9C0B7 1094 aa27.14■■□□□ 1.93
SMARCD1-203ENST00000547247 PNMA3Q9UL41 463 aa27.14■■□□□ 1.93
SMARCD1-203ENST00000547247 CCDC69A6NI79 296 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 BMP3P12645 472 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 IRX3P78415 501 aaPredicted RBP27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 TAF1CQ15572 869 aaPredicted RBP27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 NFXL1Q6ZNB6 911 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 CATSPERGQ6ZRH7 1159 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 Q6ZUG5 572 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 DCAF4Q8WV16 495 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 TBC1D32Q96NH3 1257 aa27.13■■□□□ 1.93
SMARCD1-203ENST00000547247 PDHBP11177 359 aa27.12■■□□□ 1.93
SMARCD1-203ENST00000547247 CHMP4CQ96CF2 233 aa27.12■■□□□ 1.93
SMARCD1-203ENST00000547247 ASCC2Q9H1I8 757 aaPredicted RBP27.12■■□□□ 1.93
SMARCD1-203ENST00000547247 RNF186Q9NXI6 227 aa27.12■■□□□ 1.93
SMARCD1-203ENST00000547247 CA12O43570 354 aa27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 CATIPQ7Z7H3 387 aa27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 SGMS1Q86VZ5 419 aa27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 FBXL16Q8N461 479 aa27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 PARK7Q99497 189 aaKnown RBP27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 TSKSQ9UJT2 592 aa27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 ISY1Q9ULR0 285 aaKnown RBP27.11■■□□□ 1.93
SMARCD1-203ENST00000547247 TRPA1O75762 1119 aa27.1■■□□□ 1.93
SMARCD1-203ENST00000547247 SNHG28P0DPA3 235 aa27.1■■□□□ 1.93
SMARCD1-203ENST00000547247 RASGRP2Q7LDG7 609 aa27.1■■□□□ 1.93
SMARCD1-203ENST00000547247 PDRG1Q9NUG6 133 aa27.1■■□□□ 1.93
SMARCD1-203ENST00000547247 CYP2C8P10632 490 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 CCDC96Q2M329 555 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 ZNF654Q8IZM8 581 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 KIF2CQ99661 725 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 AGXT2Q9BYV1 514 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 ZFYVE28Q9HCC9 887 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 FLOT1O75955 427 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 CTCFP49711 727 aaPredicted RBP27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 COG2Q14746 738 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 KCTD1Q719H9 257 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 SAGE1Q9NXZ1 904 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 SLC12A7Q9Y666 1083 aa27.09■■□□□ 1.93
SMARCD1-203ENST00000547247 ZNF543Q08ER8 600 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 TROAPQ12815 778 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 CRHR2Q13324 411 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 SYNE3Q6ZMZ3 975 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 SMCR8Q8TEV9 937 aaPredicted RBP27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 BRF1Q92994 677 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 P2RX7Q99572 595 aaKnown RBP27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 HOXC10Q9NYD6 342 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 FEM1BQ9UK73 627 aa27.08■■□□□ 1.93
SMARCD1-203ENST00000547247 TMEM232C9JQI7 657 aa27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 DDAH1O94760 285 aa27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 HSPA8P11142 646 aaKnown RBP27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 NEK4P51957 841 aa27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 GPATCH4Q5T3I0 446 aaKnown RBP27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 CFHR5Q9BXR6 569 aa27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 FBXO28Q9NVF7 368 aa27.07■■□□□ 1.92
SMARCD1-203ENST00000547247 PARP1P09874 1014 aaKnown RBP27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 STAT2P52630 851 aa27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 HERVK_113P62684 666 aa27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 CHURC1Q8WUH1 139 aa27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 NUP133Q8WUM0 1156 aa27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 FRMPD2Q68DX3 1309 aaPredicted RBP27.06■■□□□ 1.92
SMARCD1-203ENST00000547247 PLA2G6O60733 806 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 LBX1P52954 281 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 IKQ13123 557 aaPredicted RBP27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 ASPRV1Q53RT3 343 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 APOA5Q6Q788 366 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 FAM160B2Q86V87 743 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 SLF1Q9BQI6 1058 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 MYL10Q9BUA6 226 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 ALDH8A1Q9H2A2 487 aaPredicted RBP27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 GPCPD1Q9NPB8 672 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 BRPF3Q9ULD4 1205 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 MYPNQ86TC9 1320 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 KLF18A0A0U1RQI7 1052 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 TLR2O60603 784 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 TBC1D8O95759 1140 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 CALM1P0DP23 149 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 CALM2P0DP24 149 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 CALM3P0DP25 149 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 DSG3P32926 999 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 APOBRQ0VD83 1088 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 TOB2Q14106 344 aaPredicted RBP27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 SAMD1Q6SPF0 538 aaPredicted RBP27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 PRPF38AQ8NAV1 312 aaKnown RBP27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 MAP3K14Q99558 947 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 PPP1R9AQ9ULJ8 1098 aa27.05■■□□□ 1.92
SMARCD1-203ENST00000547247 SPDYE16A6NNV3 312 aaPredicted RBP27.04■■□□□ 1.92
SMARCD1-203ENST00000547247 GOLGA8HP0CJ92 632 aa27.04■■□□□ 1.92
SMARCD1-203ENST00000547247 GCLCP48506 637 aaPredicted RBP27.04■■□□□ 1.92
SMARCD1-203ENST00000547247 GTF3C2Q8WUA4 911 aaPredicted RBP27.04■■□□□ 1.92
SMARCD1-203ENST00000547247 GRM4Q14833 912 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 RABEP1Q15276 862 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 ANKRD1Q15327 319 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 TTBK2Q6IQ55 1244 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 LBX2Q6XYB7 198 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 MICU3Q86XE3 530 aa27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 CTCFLQ8NI51 663 aaPredicted RBP27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 NAP1L2Q9ULW6 460 aaPredicted RBP27.03■■□□□ 1.92
SMARCD1-203ENST00000547247 ADGRA2Q96PE1 1338 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 ZBTB43O43298 467 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 BTNL9Q6UXG8 535 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms