RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 HMX1Q9NP08 348 aaPredicted RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 PRDM1O75626 825 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 FLOT1O75955 427 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
BEST3-208ENST00000547208 APPP05067 770 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 HOXC6P09630 235 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
BEST3-208ENST00000547208 CAPN2P17655 700 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
BEST3-208ENST00000547208 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
BEST3-208ENST00000547208 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
BEST3-208ENST00000547208 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 MKNK2Q9HBH9 465 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 FBXO28Q9NVF7 368 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
BEST3-208ENST00000547208 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 TMEM132BQ14DG7 1078 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 REPS2Q8NFH8 660 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 NPLOC4Q8TAT6 608 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 DIS3LQ8TF46 1054 aaKnown RBP12.3□□□□□ -0.44
BEST3-208ENST00000547208 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 OGDHLQ9ULD0 1010 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 MCM3APO60318 1980 aa12.3□□□□□ -0.44
BEST3-208ENST00000547208 A0A0D9SFI3 127 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 F5H6K3 240 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 ERCC3P19447 782 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 CCND3P30281 292 aaPredicted RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 NUCB1Q02818 461 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 KLRC3Q07444 240 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 PPARAQ07869 468 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 LHX8Q68G74 356 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 ANKLE1Q8NAG6 615 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 DPF3Q92784 378 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 MKL1Q969V6 931 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 CEP95Q96GE4 821 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 FAM227BQ96M60 508 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 NAPBQ9H115 298 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 ZNF214Q9UL59 606 aaPredicted RBP12.29□□□□□ -0.44
BEST3-208ENST00000547208 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
BEST3-208ENST00000547208 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
BEST3-208ENST00000547208 VWA5AO00534 786 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 STRNO43815 780 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 NDUFB10O96000 172 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 ADORA2AP29274 412 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 B4GALNT3Q6L9W6 998 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 CHD1LQ86WJ1 897 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 PLEKHM2Q8IWE5 1019 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 MROH8Q9H579 483 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
BEST3-208ENST00000547208 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
BEST3-208ENST00000547208 LCTP09848 1927 aa12.28□□□□□ -0.44
BEST3-208ENST00000547208 COBLO75128 1261 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 PDE4BQ07343 736 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 PLS1Q14651 629 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 ALX1Q15699 326 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 ZNF589Q86UQ0 364 aaPredicted RBP12.27□□□□□ -0.45
BEST3-208ENST00000547208 ZNF444Q8N0Y2 327 aaPredicted RBP12.27□□□□□ -0.45
BEST3-208ENST00000547208 ABRAQ8N0Z2 381 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
BEST3-208ENST00000547208 TTLL1O95922 423 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 FGRP09769 529 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 TSPY3P0CV98 308 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 TSPY8P0CW00 308 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 CYBAP13498 195 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms