RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
DDX54-203ENST00000546869 GPRC5AQ8NFJ5 357 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 TNKSO95271 1327 aa17■□□□□ 0.31
DDX54-203ENST00000546869 FDX1P10109 184 aa17■□□□□ 0.31
DDX54-203ENST00000546869 MCM5P33992 734 aa17■□□□□ 0.31
DDX54-203ENST00000546869 SLC1A4P43007 532 aa17■□□□□ 0.31
DDX54-203ENST00000546869 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
DDX54-203ENST00000546869 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
DDX54-203ENST00000546869 RASEFQ8IZ41 740 aa17■□□□□ 0.31
DDX54-203ENST00000546869 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
DDX54-203ENST00000546869 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
DDX54-203ENST00000546869 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
DDX54-203ENST00000546869 WDR19Q8NEZ3 1342 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 RAD21O60216 631 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 CNMDO75829 334 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 HMGB1P09429 215 aaKnown RBP16.99■□□□□ 0.31
DDX54-203ENST00000546869 MCCP23508 829 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 ANTXR2P58335 489 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 FAM160B2Q86V87 743 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 CHURC1Q8WUH1 139 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 NEK1Q96PY6 1258 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 SLF1Q9BQI6 1058 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
DDX54-203ENST00000546869 ERICH2A1L162 156 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 PRMT2P55345 433 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 ERVK-24P63145 666 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 Q3C1V9 767 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
DDX54-203ENST00000546869 COL13A1Q5TAT6 717 aaPredicted RBP16.98■□□□□ 0.31
DDX54-203ENST00000546869 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 PNMA1Q8ND90 353 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
DDX54-203ENST00000546869 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
DDX54-203ENST00000546869 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 VWA5AO00534 786 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 IFIT3O14879 490 aaKnown RBP16.97■□□□□ 0.31
DDX54-203ENST00000546869 ATP2A1O14983 1001 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 PDHBP11177 359 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 HOXD10P28358 340 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 PSMC4P43686 418 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 STAT2P52630 851 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 FCGRTP55899 365 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 CCNA1P78396 465 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 EXOSC10Q01780 885 aaKnown RBP16.97■□□□□ 0.31
DDX54-203ENST00000546869 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
DDX54-203ENST00000546869 OTOP1Q7RTM1 612 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 ATG4CQ96DT6 458 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 FBXO28Q9NVF7 368 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 MYH4Q9Y623 1939 aa16.97■□□□□ 0.31
DDX54-203ENST00000546869 PRC1O43663 620 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 CTGFP29279 349 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 MAPK4P31152 587 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 LIFRP42702 1097 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 CAP1Q01518 475 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 ZNF543Q08ER8 600 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 ADCK5Q3MIX3 580 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 DHX32Q7L7V1 743 aaKnown RBP16.96■□□□□ 0.31
DDX54-203ENST00000546869 SHCBP1Q8NEM2 672 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 TRIM47Q96LD4 638 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 SNX14Q9Y5W7 946 aa16.96■□□□□ 0.31
DDX54-203ENST00000546869 RLFQ13129 1914 aa16.96■□□□□ 0.3
DDX54-203ENST00000546869 CASP8AP2Q9UKL3 1982 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
DDX54-203ENST00000546869 PSMA5P28066 241 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 OAZ1P54368 228 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 WTAPQ15007 396 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 FBXL16Q8N461 479 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 MAP3K14Q99558 947 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 SPATC1LQ9H0A9 340 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 TRIM17Q9Y577 477 aa16.95■□□□□ 0.3
DDX54-203ENST00000546869 ZBED4O75132 1171 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 SLC25A27O95847 323 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 COPB2P35606 906 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 TMEM132BQ14DG7 1078 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 ASPRV1Q53RT3 343 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 KCTD1Q719H9 257 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 CHST3Q7LGC8 479 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 COA7Q96BR5 231 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 TM6SF1Q9BZW5 370 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 SRRDQ9UH36 339 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 PTPN22Q9Y2R2 807 aa16.94■□□□□ 0.3
DDX54-203ENST00000546869 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
DDX54-203ENST00000546869 TNPO2O14787 897 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms