RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RSRP1Q9BUV0 290 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 ZCCHC4Q9H5U6 513 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 HRKO00198 91 aa7.72□□□□□ -1.17
CCDC38-204ENST00000546816 NMIQ13287 307 aaPredicted RBP7.72□□□□□ -1.17
CCDC38-204ENST00000546816 SIRT2Q8IXJ6 389 aa7.72□□□□□ -1.17
CCDC38-204ENST00000546816 PHACTR4Q8IZ21 702 aa7.72□□□□□ -1.17
CCDC38-204ENST00000546816 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
CCDC38-204ENST00000546816 RGS13O14921 159 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 NRDCO43847 1150 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 TRIM13O60858 407 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 USP2O75604 605 aaPredicted RBP7.71□□□□□ -1.18
CCDC38-204ENST00000546816 GARTP22102 1010 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 MPP2Q14168 576 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 ADGRF1Q5T601 910 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 DAGLBQ8NCG7 672 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 MAP6Q96JE9 813 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 FAM161BQ96MY7 647 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
CCDC38-204ENST00000546816 TMEM82A0PJX8 343 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 RFXAPO00287 272 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 UBOX5O94941 541 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 RPL10P27635 214 aaKnown RBP7.7□□□□□ -1.18
CCDC38-204ENST00000546816 GBP1P32455 592 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-204ENST00000546816 KIR2DL1P43626 348 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-204ENST00000546816 KIR2DL2P43627 348 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-204ENST00000546816 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 FBXO33Q7Z6M2 555 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 RELL1Q8IUW5 271 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 TMEM151BQ8IW70 566 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 PANK1Q8TE04 598 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 ASCC2Q9H1I8 757 aaPredicted RBP7.7□□□□□ -1.18
CCDC38-204ENST00000546816 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
CCDC38-204ENST00000546816 FOXD2O60548 495 aaPredicted RBP7.69□□□□□ -1.18
CCDC38-204ENST00000546816 PI3P19957 117 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 SRSF3P84103 164 aaKnown RBP7.69□□□□□ -1.18
CCDC38-204ENST00000546816 FAM160A1Q05DH4 1040 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 WAPLQ7Z5K2 1190 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 GOLM1Q8NBJ4 401 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 FBXO27Q8NI29 283 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 TCTN2Q96GX1 697 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 SIGLEC10Q96LC7 697 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 FOXP3Q9BZS1 431 aa7.69□□□□□ -1.18
CCDC38-204ENST00000546816 SLC22A31A6NKX4 558 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 RNF4P78317 190 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
CCDC38-204ENST00000546816 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
CCDC38-204ENST00000546816 NBPF9Q3BBW0 867 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 TMC3Q7Z5M5 1100 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 ZNF655Q8N720 491 aaPredicted RBP7.68□□□□□ -1.18
CCDC38-204ENST00000546816 LINC00116Q8NCU8 138 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 DACT3Q96B18 629 aaPredicted RBP7.68□□□□□ -1.18
CCDC38-204ENST00000546816 HHIPL1Q96JK4 782 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 ZMYM5Q9UJ78 669 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
CCDC38-204ENST00000546816 YBX1P67809 324 aaKnown RBP7.67□□□□□ -1.18
CCDC38-204ENST00000546816 PWP1Q13610 501 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 BBS9Q3SYG4 887 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 SNAP47Q5SQN1 464 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 NBPF12Q5TAG4 269 aaPredicted RBP7.67□□□□□ -1.18
CCDC38-204ENST00000546816 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 EPB41L4AQ9HCS5 686 aaPredicted RBP7.67□□□□□ -1.18
CCDC38-204ENST00000546816 RTEL1Q9NZ71 1219 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 IRAK3Q9Y616 596 aa7.67□□□□□ -1.18
CCDC38-204ENST00000546816 PNLIPP16233 465 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 VIPR1P32241 457 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 EPHB3P54753 998 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 PCBP3P57721 371 aaKnown RBP7.66□□□□□ -1.18
CCDC38-204ENST00000546816 SLC14A2Q15849 920 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 ARSHQ5FYA8 562 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 CEP128Q6ZU80 1094 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 XYLT2Q9H1B5 865 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 CNTD2Q9H8S5 307 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 SIRT5Q9NXA8 310 aa7.66□□□□□ -1.18
CCDC38-204ENST00000546816 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 IRS4O14654 1257 aaPredicted RBP7.65□□□□□ -1.18
CCDC38-204ENST00000546816 N4BP3O15049 544 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 CHMP4BP1P59074 171 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 SNW1Q13573 536 aaKnown RBP7.65□□□□□ -1.18
CCDC38-204ENST00000546816 NFIXQ14938 502 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 ZPBP2Q6X784 338 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 PLCD4Q9BRC7 762 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.65□□□□□ -1.18
CCDC38-204ENST00000546816 GZF1Q9H116 711 aaPredicted RBP7.65□□□□□ -1.18
CCDC38-204ENST00000546816 KCNQ5Q9NR82 932 aa7.65□□□□□ -1.18
CCDC38-204ENST00000546816 SORBS3O60504 671 aa7.64□□□□□ -1.19
CCDC38-204ENST00000546816 ATE1O95260 518 aa7.64□□□□□ -1.19
CCDC38-204ENST00000546816 SYPP08247 313 aa7.64□□□□□ -1.19
CCDC38-204ENST00000546816 ERVFRD-1P60508 538 aa7.64□□□□□ -1.19
CCDC38-204ENST00000546816 GMIPQ9P107 970 aa7.64□□□□□ -1.19
CCDC38-204ENST00000546816 ROBO2Q9HCK4 1378 aa7.63□□□□□ -1.19
CCDC38-204ENST00000546816 TLR3O15455 904 aaKnown RBP7.63□□□□□ -1.19
CCDC38-204ENST00000546816 PRAMEF1O95521 474 aa7.63□□□□□ -1.19
CCDC38-204ENST00000546816 RAG1P15918 1043 aa7.63□□□□□ -1.19
CCDC38-204ENST00000546816 SYN1P17600 705 aa7.63□□□□□ -1.19
CCDC38-204ENST00000546816 SDHBP21912 280 aa7.63□□□□□ -1.19
CCDC38-204ENST00000546816 AFF3P51826 1226 aaKnown RBP7.63□□□□□ -1.19
CCDC38-204ENST00000546816 MLECQ14165 292 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms