RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 USP5P45974 858 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 SEPT2Q15019 361 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
SSH1-205ENST00000546812 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 CERS3Q8IU89 383 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 SLC28A3Q9HAS3 691 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
SSH1-205ENST00000546812 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 SLC25A27O95847 323 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 GNAI3P08754 354 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 ACRP10323 421 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 CYP7A1P22680 504 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 CDK7P50613 346 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 TFF2Q03403 129 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSH1-205ENST00000546812 KCNA10Q16322 511 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 ZNF792Q3KQV3 632 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 CCSAPQ6IQ19 270 aaPredicted RBP11.27□□□□□ -0.61
SSH1-205ENST00000546812 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 HERVK_113Q902F9 699 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
SSH1-205ENST00000546812 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
SSH1-205ENST00000546812 NKX2-4Q9H2Z4 354 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
SSH1-205ENST00000546812 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
SSH1-205ENST00000546812 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 ELP1O95163 1332 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 MROH7Q68CQ1 1323 aa11.27□□□□□ -0.61
SSH1-205ENST00000546812 PGK2P07205 417 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 ZAP70P43403 619 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 PLCD1P51178 756 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
SSH1-205ENST00000546812 MIGA1Q8NAN2 632 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 ZNF512BQ96KM6 892 aaPredicted RBP11.26□□□□□ -0.61
SSH1-205ENST00000546812 GLT1D1Q96MS3 346 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 MMP19Q99542 508 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 CNPY2Q9Y2B0 182 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 YBX2Q9Y2T7 364 aaKnown RBP11.26□□□□□ -0.61
SSH1-205ENST00000546812 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
SSH1-205ENST00000546812 ERC2O15083 957 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 FLOT1O75955 427 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 KCNQ1P51787 676 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 KCTD2Q14681 263 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 TMEM132BQ14DG7 1078 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 DBNDD2Q9BQY9 259 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
SSH1-205ENST00000546812 IL23AQ9NPF7 189 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 GPR108Q9NPR9 543 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 FAM184BQ9ULE4 1060 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
SSH1-205ENST00000546812 ARVCFO00192 962 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
SSH1-205ENST00000546812 DUSP11O75319 330 aaKnown RBP11.24□□□□□ -0.61
SSH1-205ENST00000546812 FGBP02675 491 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 CST5P28325 142 aaPredicted RBP11.24□□□□□ -0.61
SSH1-205ENST00000546812 GABPAQ06546 454 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 RIOX2Q8IUF8 465 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 MICALL1Q8N3F8 863 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
SSH1-205ENST00000546812 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
SSH1-205ENST00000546812 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 ADAMTS5Q9UNA0 930 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 TRANK1O15050 2925 aa11.24□□□□□ -0.61
SSH1-205ENST00000546812 SMCHD1A6NHR9 2005 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 APBB1O00213 710 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 GPR37L1O60883 481 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 IDH1O75874 414 aaKnown RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 POLR3DP05423 398 aaPredicted RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 ASGR1P07306 291 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 POU3F3P20264 500 aaPredicted RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 CYP2C18P33260 490 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 STAT3P40763 770 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
SSH1-205ENST00000546812 TMEM179Q6ZVK1 233 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 SIAH1Q8IUQ4 282 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 FAM126BQ8IXS8 530 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 SPICE1Q8N0Z3 855 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 TMX2Q9Y320 296 aa11.23□□□□□ -0.61
SSH1-205ENST00000546812 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 TLL1O43897 1013 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
SSH1-205ENST00000546812 CD4P01730 458 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
SSH1-205ENST00000546812 COPB2P35606 906 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 715.2 ms