RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
TMEM116-203ENST00000546537 MB21D1Q8N884 522 aa13.25□□□□□ -0.29
TMEM116-203ENST00000546537 KLHDC9Q8NEP7 349 aa13.25□□□□□ -0.29
TMEM116-203ENST00000546537 KHSRPQ92945 711 aaKnown RBP eCLIP13.25□□□□□ -0.298e-7■■□□□ 12.4
TMEM116-203ENST00000546537 TINF2Q9BSI4 451 aa13.25□□□□□ -0.29
TMEM116-203ENST00000546537 EHD4Q9H223 541 aa13.25□□□□□ -0.29
TMEM116-203ENST00000546537 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 TLL1O43897 1013 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 PLS1Q14651 629 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 LENG1Q96BZ8 264 aaPredicted RBP13.24□□□□□ -0.29
TMEM116-203ENST00000546537 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 SERPINB13Q9UIV8 391 aa13.24□□□□□ -0.29
TMEM116-203ENST00000546537 ELP1O95163 1332 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-203ENST00000546537 DSG3P32926 999 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
TMEM116-203ENST00000546537 KCNA10Q16322 511 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
TMEM116-203ENST00000546537 COG5Q9UP83 839 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
TMEM116-203ENST00000546537 DIS3Q9Y2L1 958 aaKnown RBP13.23□□□□□ -0.29
TMEM116-203ENST00000546537 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 APBB1O00213 710 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 FGBP02675 491 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
TMEM116-203ENST00000546537 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 FAM126BQ8IXS8 530 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
TMEM116-203ENST00000546537 PRRC2BQ5JSZ5 2229 aaKnown RBP13.22□□□□□ -0.29
TMEM116-203ENST00000546537 PI4K2BG5E9Z4 385 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 IGSF3O75054 1194 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 SLC25A27O95847 323 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 PGK2P07205 417 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
TMEM116-203ENST00000546537 CYP2C18P33260 490 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 SHMT1P34896 483 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 MRE11P49959 708 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 RABGGTBP53611 331 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 SEPT2Q15019 361 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 MMP19Q99542 508 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 CNPY2Q9Y2B0 182 aa13.21□□□□□ -0.29
TMEM116-203ENST00000546537 MYADML2A6NDP7 307 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 SMIM22K7EJ46 135 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 ARVCFO00192 962 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
TMEM116-203ENST00000546537 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 CD4P01730 458 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
TMEM116-203ENST00000546537 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 KIAA1755Q5JYT7 1200 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 OTOP2Q7RTS6 562 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 PCDHA11Q9Y5I1 949 aa13.2□□□□□ -0.3
TMEM116-203ENST00000546537 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-203ENST00000546537 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-203ENST00000546537 DUSP11O75319 330 aaKnown RBP13.19□□□□□ -0.3
TMEM116-203ENST00000546537 FLOT1O75955 427 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 ASGR1P07306 291 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 MYOGP15173 224 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 USP5P45974 858 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-203ENST00000546537 KCTD2Q14681 263 aa13.19□□□□□ -0.3
TMEM116-203ENST00000546537 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
TMEM116-203ENST00000546537 MYH8P13535 1937 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 RFXAPO00287 272 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 PLCD1P51178 756 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 MTX1Q13505 466 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 CERS3Q8IU89 383 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
TMEM116-203ENST00000546537 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 MEIS3Q99687 375 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 NAV1Q8NEY1 1877 aa13.18□□□□□ -0.3
TMEM116-203ENST00000546537 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-203ENST00000546537 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-203ENST00000546537 CYP7A1P22680 504 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 GABPAQ06546 454 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 HLA-CQ95604 372 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
TMEM116-203ENST00000546537 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
TMEM116-203ENST00000546537 MCM3APO60318 1980 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms