RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
CIT-217ENST00000545913 RAB3IPQ96QF0 476 aaPredicted RBP12.9□□□□□ -0.34
CIT-217ENST00000545913 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 TFAP4Q01664 338 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 KRT12Q99456 494 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
CIT-217ENST00000545913 PPARAQ07869 468 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
CIT-217ENST00000545913 IRX4P78413 519 aa12.9□□□□□ -0.35
CIT-217ENST00000545913 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.35
CIT-217ENST00000545913 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.35
CIT-217ENST00000545913 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.35
CIT-217ENST00000545913 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.35
CIT-217ENST00000545913 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 ZSCAN10Q96SZ4 725 aaPredicted RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 FAM207AQ9NSI2 230 aaPredicted RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 ZAP70P43403 619 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 DMP1Q13316 513 aaPredicted RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 PNOCQ13519 176 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KRT81Q14533 505 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 PSMB7Q99436 277 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 CABS1Q96KC9 395 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 ANKRD20A3Q5VUR7 823 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 RILPQ96NA2 401 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 KRT71Q3SY84 523 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 SMAP1Q8IYB5 467 aaPredicted RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 SMCR8Q8TEV9 937 aaPredicted RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 SLF1Q9BQI6 1058 aa12.89□□□□□ -0.35
CIT-217ENST00000545913 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
CIT-217ENST00000545913 RGS16O15492 202 aaPredicted RBP12.88□□□□□ -0.35
CIT-217ENST00000545913 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
CIT-217ENST00000545913 KRT26Q7Z3Y9 468 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 CEP120Q8N960 986 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
CIT-217ENST00000545913 MORC3Q14149 939 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 DLGAP5Q15398 846 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 A1BGP04217 495 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
CIT-217ENST00000545913 JAK2O60674 1132 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
CIT-217ENST00000545913 RNF10Q8N5U6 811 aaKnown RBP12.88□□□□□ -0.35
CIT-217ENST00000545913 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 PSTPIP2Q9H939 334 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 LONRF2Q1L5Z9 754 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 NSMFQ6X4W1 530 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 BLIDQ8IZY5 108 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 CSADQ9Y600 493 aa12.88□□□□□ -0.35
CIT-217ENST00000545913 BRD3Q15059 726 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 CCDC170Q8IYT3 715 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 GLG1Q92896 1179 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 H7C1D1 291 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 NELFCDQ8IXH7 590 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 STAM2O75886 525 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 TROVE2P10155 538 aaKnown RBP eCLIP12.87□□□□□ -0.35
CIT-217ENST00000545913 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 MIER3Q7Z3K6 550 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 PALM2Q8IXS6 379 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
CIT-217ENST00000545913 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
CIT-217ENST00000545913 PLCB4Q15147 1175 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 ME3Q16798 604 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 RNF40O75150 1001 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
CIT-217ENST00000545913 RPS6KA2Q15349 733 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 XPO4Q9C0E2 1151 aaKnown RBP12.87□□□□□ -0.35
CIT-217ENST00000545913 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
CIT-217ENST00000545913 NR1I2O75469 434 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms