RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ADAMTS5Q9UNA0 930 aa25.23■■□□□ 1.63
SCARB1-210ENST00000545493 PFASO15067 1338 aa25.22■■□□□ 1.63
SCARB1-210ENST00000545493 APPP05067 770 aa25.22■■□□□ 1.63
SCARB1-210ENST00000545493 CCDC129Q6ZRS4 1044 aa25.22■■□□□ 1.63
SCARB1-210ENST00000545493 STAP2Q9UGK3 403 aa25.22■■□□□ 1.63
SCARB1-210ENST00000545493 PPP1R9AQ9ULJ8 1098 aa25.22■■□□□ 1.63
SCARB1-210ENST00000545493 DNAH12Q6ZR08 3092 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 TRIOBPQ9H2D6 2365 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 PDE1AP54750 535 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 PLS1Q14651 629 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 MFSD14CQ5VZR4 134 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 REPS2Q8NFH8 660 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 NUP88Q99567 741 aaPredicted RBP25.21■■□□□ 1.63
SCARB1-210ENST00000545493 C11orf49Q9H6J7 331 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 NYAP2Q9P242 653 aa25.21■■□□□ 1.63
SCARB1-210ENST00000545493 RAD21O60216 631 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 EVI5O60447 810 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 NDUFB10O96000 172 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 FXR1P51114 621 aaKnown RBP eCLIP25.2■■□□□ 1.62
SCARB1-210ENST00000545493 NCAPG2Q86XI2 1143 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 NACAP1Q9BZK3 213 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 NBPF3Q9H094 633 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 PRO3102Q9H379 93 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 MROH8Q9H579 483 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.62
SCARB1-210ENST00000545493 NR2E3Q9Y5X4 410 aa25.2■■□□□ 1.62
SCARB1-210ENST00000545493 COBLO75128 1261 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 CYP2C19P33261 490 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 PPARAQ07869 468 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 TRPV1Q8NER1 839 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 CEP95Q96GE4 821 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 NAPBQ9H115 298 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 ZNF214Q9UL59 606 aaPredicted RBP25.19■■□□□ 1.62
SCARB1-210ENST00000545493 PLXNA1Q9UIW2 1896 aa25.19■■□□□ 1.62
SCARB1-210ENST00000545493 VWA5AO00534 786 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 STRNO43815 780 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 COL6A1P12109 1028 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 CYBAP13498 195 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 OLFML2BQ68BL8 750 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 DPP9Q86TI2 863 aa25.18■■□□□ 1.62
SCARB1-210ENST00000545493 RBM27Q9P2N5 1060 aaKnown RBP25.18■■□□□ 1.62
SCARB1-210ENST00000545493 F5H6K3 240 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 KLRC3Q07444 240 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 ABRAQ8N0Z2 381 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 EVI5LQ96CN4 794 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 ZNF287Q9HBT7 754 aa25.17■■□□□ 1.62
SCARB1-210ENST00000545493 ZNFX1Q9P2E3 1918 aaKnown RBP25.16■■□□□ 1.62
SCARB1-210ENST00000545493 SLC25A27O95847 323 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 AAMPQ13685 434 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 VPS53Q5VIR6 699 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 RIOX2Q8IUF8 465 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 SMC5Q8IY18 1101 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 C7orf61Q8IZ16 206 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 ZNF444Q8N0Y2 327 aaPredicted RBP25.16■■□□□ 1.62
SCARB1-210ENST00000545493 LRRC47Q8N1G4 583 aaKnown RBP25.16■■□□□ 1.62
SCARB1-210ENST00000545493 SLF1Q9BQI6 1058 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 MTMR4Q9NYA4 1195 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 CLIP2Q9UDT6 1046 aa25.16■■□□□ 1.62
SCARB1-210ENST00000545493 DDX20Q9UHI6 824 aaKnown RBP25.16■■□□□ 1.62
SCARB1-210ENST00000545493 FAM47AQ5JRC9 791 aa25.15■■□□□ 1.62
SCARB1-210ENST00000545493 NEDD1Q8NHV4 660 aa25.15■■□□□ 1.62
SCARB1-210ENST00000545493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.15■■□□□ 1.621e-7■■■■□ 24.4
SCARB1-210ENST00000545493 A0A0D9SFI3 127 aa25.14■■□□□ 1.62
SCARB1-210ENST00000545493 PDE4BQ07343 736 aa25.14■■□□□ 1.62
SCARB1-210ENST00000545493 MKL1Q969V6 931 aa25.14■■□□□ 1.62
SCARB1-210ENST00000545493 MAML3Q96JK9 1138 aa25.14■■□□□ 1.62
SCARB1-210ENST00000545493 TTLL1O95922 423 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 TSPY3P0CV98 308 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 TSPY8P0CW00 308 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 STAT3P40763 770 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 EXOC6Q8TAG9 804 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 FAM227BQ96M60 508 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 MMP19Q99542 508 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 SYNPO2Q9UMS6 1093 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 TACC3Q9Y6A5 838 aa25.13■■□□□ 1.61
SCARB1-210ENST00000545493 SLC3A2P08195 630 aaKnown RBP25.12■■□□□ 1.61
SCARB1-210ENST00000545493 FCER1AP12319 257 aa25.12■■□□□ 1.61
SCARB1-210ENST00000545493 CNGA1P29973 690 aa25.12■■□□□ 1.61
SCARB1-210ENST00000545493 CTDSPL2Q05D32 466 aa25.12■■□□□ 1.61
SCARB1-210ENST00000545493 GMCL1P1Q8NEA9 526 aa25.12■■□□□ 1.61
SCARB1-210ENST00000545493 HELLSQ9NRZ9 838 aa25.12■■□□□ 1.61
SCARB1-210ENST00000545493 MSCO60682 206 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 PGK2P07205 417 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 TFAP4Q01664 338 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 B4GALNT3Q6L9W6 998 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 TEX13BQ9BXU2 312 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 SLC5A4Q9NY91 659 aa25.11■■□□□ 1.61
SCARB1-210ENST00000545493 ZMYND8Q9ULU4 1186 aaPredicted RBP25.11■■□□□ 1.61
SCARB1-210ENST00000545493 IGHDP01880 384 aa25.1■■□□□ 1.61
SCARB1-210ENST00000545493 COPB2P35606 906 aa25.1■■□□□ 1.61
SCARB1-210ENST00000545493 SNRNP48Q6IEG0 339 aaKnown RBP25.1■■□□□ 1.61
SCARB1-210ENST00000545493 ZNF589Q86UQ0 364 aaPredicted RBP25.1■■□□□ 1.61
SCARB1-210ENST00000545493 INCENPQ9NQS7 918 aa25.1■■□□□ 1.61
SCARB1-210ENST00000545493 PCDH10Q9P2E7 1040 aa25.1■■□□□ 1.61
SCARB1-210ENST00000545493 NMIQ13287 307 aaPredicted RBP25.09■■□□□ 1.61
SCARB1-210ENST00000545493 LRRC26Q2I0M4 334 aa25.09■■□□□ 1.61
SCARB1-210ENST00000545493 RWDD1Q9H446 243 aaPredicted RBP25.09■■□□□ 1.61
SCARB1-210ENST00000545493 ANAPC4Q9UJX5 808 aa25.09■■□□□ 1.61
SCARB1-210ENST00000545493 RIPK3Q9Y572 518 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms