RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
CHD4-212ENST00000545083 FCER1AP12319 257 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 ACLYP53396 1101 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
CHD4-212ENST00000545083 TMEM132BQ14DG7 1078 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 CCSAPQ6IQ19 270 aaPredicted RBP11.46□□□□□ -0.57
CHD4-212ENST00000545083 MFSD5Q6N075 450 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 SIAH1Q8IUQ4 282 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
CHD4-212ENST00000545083 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 MB21D1Q8N884 522 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 GPR108Q9NPR9 543 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
CHD4-212ENST00000545083 NRBP1Q9UHY1 535 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 TNNQ9UQP3 1299 aa11.46□□□□□ -0.57
CHD4-212ENST00000545083 REV3LO60673 3130 aa11.46□□□□□ -0.58
CHD4-212ENST00000545083 PLXNA1Q9UIW2 1896 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 SYNRGQ9UMZ2 1314 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
CHD4-212ENST00000545083 IGSF3O75054 1194 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 FLOT1O75955 427 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 ACRP10323 421 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 CSF2RAP15509 400 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 IGFBP4P22692 258 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
CHD4-212ENST00000545083 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 MMP19Q99542 508 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
CHD4-212ENST00000545083 TSEN34Q9BSV6 310 aaKnown RBP11.45□□□□□ -0.58
CHD4-212ENST00000545083 ANTXR1Q9H6X2 564 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 STARD7Q9NQZ5 370 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 DBNLQ9UJU6 430 aaKnown RBP11.45□□□□□ -0.58
CHD4-212ENST00000545083 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
CHD4-212ENST00000545083 GNAI2P04899 355 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 BMP1P13497 986 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 AKR1A1P14550 325 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 CDK7P50613 346 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.583e-7■□□□□ 9.1
CHD4-212ENST00000545083 KCNA10Q16322 511 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 ZNF365Q70YC5 407 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 NKX2-4Q9H2Z4 354 aa11.44□□□□□ -0.58
CHD4-212ENST00000545083 CXXC1Q9P0U4 656 aaPredicted RBP11.44□□□□□ -0.58
CHD4-212ENST00000545083 YBX2Q9Y2T7 364 aaKnown RBP11.44□□□□□ -0.58
CHD4-212ENST00000545083 ADCY6O43306 1168 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 CYP2D6P10635 497 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 TFF2Q03403 129 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 POLA2Q14181 598 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 PPP1R12CQ9BZL4 782 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 FBXO28Q9NVF7 368 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 ADAMTS5Q9UNA0 930 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 DIS3Q9Y2L1 958 aaKnown RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 TMX2Q9Y320 296 aa11.43□□□□□ -0.58
CHD4-212ENST00000545083 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 ZNFX1Q9P2E3 1918 aaKnown RBP11.43□□□□□ -0.58
CHD4-212ENST00000545083 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 SMIM22K7EJ46 135 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 SLC25A27O95847 323 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
CHD4-212ENST00000545083 CT47B1P0C2W7 299 aaPredicted RBP11.42□□□□□ -0.58
CHD4-212ENST00000545083 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
CHD4-212ENST00000545083 KCTD2Q14681 263 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 RAB30Q15771 203 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 TMEM179Q6ZVK1 233 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 NUP133Q8WUM0 1156 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 ARHGAP45Q92619 1136 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
CHD4-212ENST00000545083 DYNLL2Q96FJ2 89 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 C1QTNF1Q9BXJ1 281 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 VCPKMTQ9H867 229 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 MCM9Q9NXL9 1143 aa11.42□□□□□ -0.58
CHD4-212ENST00000545083 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 WDR46O15213 610 aaKnown RBP11.41□□□□□ -0.58
CHD4-212ENST00000545083 TRIM27P14373 513 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 AKR1B1P15121 316 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 CYP2C18P33260 490 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 STAT3P40763 770 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 KCNQ1P51787 676 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
CHD4-212ENST00000545083 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 FAM126BQ8IXS8 530 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 HERVK_113Q902F9 699 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 EPHX3Q9H6B9 360 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 MSRAQ9UJ68 235 aa11.41□□□□□ -0.58
CHD4-212ENST00000545083 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
CHD4-212ENST00000545083 CNPY2Q9Y2B0 182 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms