RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 DHX40Q8IX18 779 aaKnown RBP19■□□□□ 0.63
CHFR-224ENST00000545046 RRP36Q96EU6 259 aaKnown RBP19■□□□□ 0.63
CHFR-224ENST00000545046 BPIFA3Q9BQP9 254 aa19■□□□□ 0.63
CHFR-224ENST00000545046 POLR2DO15514 142 aaKnown RBP19■□□□□ 0.63
CHFR-224ENST00000545046 C21orf2O43822 256 aa19■□□□□ 0.63
CHFR-224ENST00000545046 ZNF75DP51815 510 aa19■□□□□ 0.63
CHFR-224ENST00000545046 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
CHFR-224ENST00000545046 CCDC12Q8WUD4 166 aaPredicted RBP19■□□□□ 0.63
CHFR-224ENST00000545046 DHX36Q9H2U1 1008 aaKnown RBP19■□□□□ 0.63
CHFR-224ENST00000545046 SERPINA10Q9UK55 444 aa19■□□□□ 0.63
CHFR-224ENST00000545046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19■□□□□ 0.63
CHFR-224ENST00000545046 STXBP3O00186 592 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 NFIAQ12857 509 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 PNOCQ13519 176 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 DPCR1Q3MIW9 517 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 KANK3Q6NY19 840 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.99■□□□□ 0.63
CHFR-224ENST00000545046 PLA2G4DQ86XP0 818 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 DAGLBQ8NCG7 672 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 EHD4Q9H223 541 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
CHFR-224ENST00000545046 IGKV6D-41A0A0C4DH26 115 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 TTLL1O95922 423 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 SHMT1P34896 483 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 PTGDRQ13258 359 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 SARM1Q6SZW1 724 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
CHFR-224ENST00000545046 DRC7Q8IY82 874 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 TTLL6Q8N841 843 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 SPC24Q8NBT2 197 aa18.99■□□□□ 0.63
CHFR-224ENST00000545046 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 USP17L5A8MUK1 530 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 ZNF500O60304 480 aaPredicted RBP18.98■□□□□ 0.63
CHFR-224ENST00000545046 ATP2C1P98194 919 aaPredicted RBP18.98■□□□□ 0.63
CHFR-224ENST00000545046 PPP4R3BQ5MIZ7 849 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 CCDC34Q96HJ3 373 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 CCDC17Q96LX7 622 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 IDI2Q9BXS1 227 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 CLIP2Q9UDT6 1046 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 WNT7AO00755 349 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 TPM4P67936 248 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 ASPRV1Q53RT3 343 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 RASGRP2Q7LDG7 609 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 SERTAD1Q9UHV2 236 aa18.98■□□□□ 0.63
CHFR-224ENST00000545046 SMTNL1A8MU46 457 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 MPHOSPH10O00566 681 aaKnown RBP18.97■□□□□ 0.63
CHFR-224ENST00000545046 PDHBP11177 359 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 NAPAP54920 295 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 MDM2Q00987 491 aaPredicted RBP18.97■□□□□ 0.63
CHFR-224ENST00000545046 TYW1BQ6NUM6 668 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 PDGFDQ9GZP0 370 aaPredicted RBP18.97■□□□□ 0.63
CHFR-224ENST00000545046 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 PCDHAC2Q9Y5I4 1007 aa18.97■□□□□ 0.63
CHFR-224ENST00000545046 ADAMTS3O15072 1205 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 MCM7P33993 719 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 EIF6P56537 245 aaKnown RBP18.96■□□□□ 0.63
CHFR-224ENST00000545046 TCP10Q12799 353 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 POSTNQ15063 836 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 CCDC93Q567U6 631 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 ISM2Q6H9L7 571 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 DEFB132Q7Z7B7 95 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 ZFPM1Q8IX07 1006 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PDILTQ8N807 584 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 SLC16A10Q8TF71 515 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PCDHA6Q9UN73 950 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PCDHA8Q9Y5H6 950 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 M0R2N6 131 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
CHFR-224ENST00000545046 CACNB3P54284 484 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 SOGA3Q5TF21 947 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
CHFR-224ENST00000545046 LRRC47Q8N1G4 583 aaKnown RBP18.96■□□□□ 0.63
CHFR-224ENST00000545046 TRIM34Q9BYJ4 488 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 ZMYND12Q9H0C1 365 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 RIOX1Q9H6W3 641 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 C6orf50Q9HD87 102 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PCDHA5Q9Y5H7 936 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 PSME4Q14997 1843 aa18.96■□□□□ 0.63
CHFR-224ENST00000545046 GREB1LQ9C091 1923 aaPredicted RBP18.96■□□□□ 0.62
CHFR-224ENST00000545046 VWA3AA6NCI4 1184 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 GNA11P29992 359 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 CDC25BP30305 580 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 ZNF830Q96NB3 372 aaPredicted RBP18.95■□□□□ 0.62
CHFR-224ENST00000545046 PIGSQ96S52 555 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 UBA5Q9GZZ9 404 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 FAM198AQ9UFP1 575 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 FRMPD2Q68DX3 1309 aaPredicted RBP18.95■□□□□ 0.62
CHFR-224ENST00000545046 RASGRP4Q8TDF6 673 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 SYMPKQ92797 1274 aaKnown RBP18.95■□□□□ 0.62
CHFR-224ENST00000545046 EPSTI1Q96J88 318 aa18.95■□□□□ 0.62
CHFR-224ENST00000545046 SMCO2A6NFE2 343 aa18.94■□□□□ 0.62
CHFR-224ENST00000545046 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms