RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 A0A0G2JLL6 359 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-224ENST00000544990 TRIM75PA6NK02 468 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 PDHXO00330 501 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 TLR2O60603 784 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 IGHDP01880 384 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 PLCD1P51178 756 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 PDE1AP54750 535 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 SP3Q02447 781 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 SPP2Q13103 211 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 SLFNL1Q499Z3 407 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-224ENST00000544990 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 PRRT2Q7Z6L0 340 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-224ENST00000544990 OTUD7AQ8TE49 926 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-224ENST00000544990 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 FSD1Q9BTV5 496 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 LNPKQ9C0E8 428 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 PUS7LQ9H0K6 701 aaKnown RBP8.84□□□□□ -0.99
CPSF7-224ENST00000544990 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 STAP2Q9UGK3 403 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 SLC4A4Q9Y6R1 1079 aa8.84□□□□□ -0.99
CPSF7-224ENST00000544990 MYH8P13535 1937 aa8.84□□□□□ -1
CPSF7-224ENST00000544990 BAZ2AQ9UIF9 1905 aaKnown RBP8.84□□□□□ -1
CPSF7-224ENST00000544990 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 C19orf81C9J6K1 198 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 PRKAB2O43741 272 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 GDF11O95390 407 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 GNAT2P19087 354 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 IRX6P78412 446 aaPredicted RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -1
CPSF7-224ENST00000544990 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 KIF22Q14807 665 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 CCDC84Q86UT8 332 aaPredicted RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 CHD1LQ86WJ1 897 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 EVI5LQ96CN4 794 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 PARK7Q99497 189 aaKnown RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 WDR18Q9BV38 432 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.83□□□□□ -1
CPSF7-224ENST00000544990 SWAP70Q9UH65 585 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 ZBTB21Q9ULJ3 1066 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 SLC45A1Q9Y2W3 748 aa8.83□□□□□ -1
CPSF7-224ENST00000544990 USP17L10C9JJH3 530 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 USP17L12C9JPN9 530 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 USP17L21D6R901 530 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 GPAA1O43292 621 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 GH2P01242 217 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 CHGBP05060 677 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 BACE1P56817 501 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 NUCB1Q02818 461 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 GABPAQ06546 454 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 MOGSQ13724 837 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 ABCB5Q2M3G0 1257 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 DESI1Q6ICB0 168 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 GPAT2Q6NUI2 795 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 TICAM2Q86XR7 235 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 CD99L2Q8TCZ2 262 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 OSBP2Q969R2 916 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 KCTD12Q96CX2 325 aaKnown RBP8.82□□□□□ -1
CPSF7-224ENST00000544990 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
CPSF7-224ENST00000544990 STRBPQ96SI9 672 aaKnown RBP8.82□□□□□ -1
CPSF7-224ENST00000544990 EFCC1Q9HA90 598 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 ARPP21Q9UBL0 812 aaPredicted RBP8.82□□□□□ -1
CPSF7-224ENST00000544990 AGTPBP1Q9UPW5 1226 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 TRIM17Q9Y577 477 aa8.82□□□□□ -1
CPSF7-224ENST00000544990 DDX60LQ5H9U9 1706 aaKnown RBP8.82□□□□□ -1
CPSF7-224ENST00000544990 CCDC85CA6NKD9 419 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 PATL2C9JE40 543 aaKnown RBP8.81□□□□□ -1
CPSF7-224ENST00000544990 MPHOSPH10O00566 681 aaKnown RBP8.81□□□□□ -1
CPSF7-224ENST00000544990 APPP05067 770 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 SHMT1P34896 483 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 USP14P54578 494 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 HMGCS2P54868 508 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 C12orf60Q5U649 245 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 FBXO46Q6PJ61 603 aaPredicted RBP8.81□□□□□ -1
CPSF7-224ENST00000544990 BRICD5Q6PL45 260 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 C17orf99Q6UX52 265 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 SMCR8Q8TEV9 937 aaPredicted RBP8.81□□□□□ -1
CPSF7-224ENST00000544990 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 CCDC17Q96LX7 622 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 NACAP1Q9BZK3 213 aa8.81□□□□□ -1
CPSF7-224ENST00000544990 GSG1L2A8MUP6 293 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 MINDY4BA8MYZ0 360 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 M0R2C6 588 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 GNRH1P01148 92 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CYP2C8P10632 490 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CYP2D6P10635 497 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 HOXD10P28358 340 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 TDO2P48775 406 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CDK8P49336 464 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 JAG1P78504 1218 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 LACTBP83111 547 aaPredicted RBP8.8□□□□□ -1
CPSF7-224ENST00000544990 SBK1Q52WX2 424 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms