RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TMEM132BQ14DG7 1078 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 AKNAD1Q5T1N1 836 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 SHCBP1Q8NEM2 672 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
YBX3-216ENST00000544622 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
YBX3-216ENST00000544622 RBBP6Q7Z6E9 1792 aaKnown RBP13.53□□□□□ -0.24
YBX3-216ENST00000544622 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 VWA5AO00534 786 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 RANBP6O60518 1105 aaKnown RBP13.53□□□□□ -0.24
YBX3-216ENST00000544622 EN2P19622 333 aaPredicted RBP13.53□□□□□ -0.24
YBX3-216ENST00000544622 PTPREP23469 700 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 NT5C2P49902 561 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 HAND2P61296 217 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 GRB14Q14449 540 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 NUP88Q99567 741 aaPredicted RBP13.53□□□□□ -0.24
YBX3-216ENST00000544622 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 ZNF214Q9UL59 606 aaPredicted RBP13.53□□□□□ -0.24
YBX3-216ENST00000544622 RAD50Q92878 1312 aa13.53□□□□□ -0.24
YBX3-216ENST00000544622 SLC15A5A6NIM6 579 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 ZNF213O14771 459 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 ATP2A1O14983 1001 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 INHAP05111 366 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 GJB1P08034 283 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 HOXC6P09630 235 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 CCL5P13501 91 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 CYP2B6P20813 491 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 UBXN2AP68543 259 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 MFSD6Q6ZSS7 791 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
YBX3-216ENST00000544622 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.25
YBX3-216ENST00000544622 TRIB2Q92519 343 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
YBX3-216ENST00000544622 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
YBX3-216ENST00000544622 SGSM2O43147 1006 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 STRNO43815 780 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 PLA2G6O60733 806 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 HMGCRP04035 888 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 ERCC3P19447 782 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 GJA8P48165 433 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 TTC14Q96N46 770 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
YBX3-216ENST00000544622 MROH8Q9H579 483 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 STX8Q9UNK0 236 aa13.51□□□□□ -0.25
YBX3-216ENST00000544622 NEDD4P46934 1319 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 SLC25A27O95847 323 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
YBX3-216ENST00000544622 BMP3P12645 472 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 STAT3P40763 770 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 RGS2P41220 211 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 TRIM32Q13049 653 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 UBE2Q1Q7Z7E8 422 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 RIOX2Q8IUF8 465 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
YBX3-216ENST00000544622 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 TMEM47Q9BQJ4 181 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 SLC38A10Q9HBR0 1119 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 FEM1BQ9UK73 627 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
YBX3-216ENST00000544622 RPTORQ8N122 1335 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 RAD21O60216 631 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 SGPL1O95470 568 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 MCCP23508 829 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 PTH1RQ03431 593 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 CCL14Q16627 93 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
YBX3-216ENST00000544622 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 RRP12Q5JTH9 1297 aaKnown RBP13.49□□□□□ -0.25
YBX3-216ENST00000544622 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
YBX3-216ENST00000544622 NPLOC4Q8TAT6 608 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 ANKS1AQ92625 1134 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 ESR2Q92731 530 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 APBA2Q99767 749 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
YBX3-216ENST00000544622 BIN2Q9UBW5 565 aaPredicted RBP13.49□□□□□ -0.25
YBX3-216ENST00000544622 COBLO75128 1261 aa13.48□□□□□ -0.25
YBX3-216ENST00000544622 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
YBX3-216ENST00000544622 CAPN2P17655 700 aa13.48□□□□□ -0.25
YBX3-216ENST00000544622 ADORA2AP29274 412 aa13.48□□□□□ -0.25
YBX3-216ENST00000544622 SLC1A4P43007 532 aa13.48□□□□□ -0.25
YBX3-216ENST00000544622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
YBX3-216ENST00000544622 RASGRP2Q7LDG7 609 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms