RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 GAB4Q2WGN9 574 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 AXDND1Q5T1B0 1012 aaPredicted RBP3.68□□□□□ -1.82
YBX3-214ENST00000544501 ANGEL2Q5VTE6 544 aaKnown RBP3.68□□□□□ -1.82
YBX3-214ENST00000544501 PPFIBP1Q86W92 1011 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 KLHL6Q8WZ60 621 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 UBE2FQ969M7 185 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 ZNF512BQ96KM6 892 aaPredicted RBP3.68□□□□□ -1.82
YBX3-214ENST00000544501 HDAC8Q9BY41 377 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 ATP13A1Q9HD20 1204 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 PAK6Q9NQU5 681 aaPredicted RBP3.68□□□□□ -1.82
YBX3-214ENST00000544501 ZSWIM5Q9P217 1185 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 FHOD1Q9Y613 1164 aa3.68□□□□□ -1.82
YBX3-214ENST00000544501 ANKRD34BA5PLL1 514 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 CBFA2T2O43439 604 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 TP53P04637 393 aaPredicted RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 CD8BP10966 210 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 NAT2P11245 290 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 CD247P20963 164 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 TPP2P29144 1249 aaPredicted RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 BNIP3Q12983 259 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 CLEC16AQ2KHT3 1053 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 TDRD10Q5VZ19 366 aaKnown RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 LARP1BQ659C4 914 aaKnown RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 HEATR6Q6AI08 1181 aaKnown RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 KIAA1211LQ6NV74 962 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 NFXL1Q6ZNB6 911 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 SPRED2Q7Z698 418 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 WFDC3Q8IUB2 231 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 FAM178BQ8IXR5 827 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 FLCNQ8NFG4 579 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 HNRNPLLQ8WVV9 542 aaKnown RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 UBXN4Q92575 508 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 HAUS7Q99871 368 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 TRIM55Q9BYV6 548 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 GBP3Q9H0R5 595 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 GP6Q9HCN6 339 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 CHST7Q9NS84 486 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 WHRNQ9P202 907 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 PPP1R1BQ9UD71 204 aaPredicted RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 FBXL21Q9UKT6 434 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 PCDHB10Q9UN67 800 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 DIS3Q9Y2L1 958 aaKnown RBP3.67□□□□□ -1.82
YBX3-214ENST00000544501 ZNF451Q9Y4E5 1061 aa3.67□□□□□ -1.82
YBX3-214ENST00000544501 SHISA3A0PJX4 238 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 U2SURPO15042 1029 aaKnown RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 ADAMTS4O75173 837 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 PPM1BO75688 479 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 PRAMEF1O95521 474 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 ESR1P03372 595 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 EPHX1P07099 455 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 ITGA4P13612 1032 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 FUT4P22083 530 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 ZNF445P59923 1031 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 IKZF1Q13422 519 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 SNW1Q13573 536 aaKnown RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 DDR2Q16832 855 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 NOL9Q5SY16 702 aaKnown RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 DCAF15Q66K64 600 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 SLC23A3Q6PIS1 610 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 C6orf15Q6UXA7 325 aaPredicted RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 RNF111Q6ZNA4 994 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 EEPD1Q7L9B9 569 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 LRP10Q7Z4F1 713 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 TMC3Q7Z5M5 1100 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 TP53INP2Q8IXH6 220 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 Q8N3U1 123 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 LINC00116Q8NCU8 138 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 DHX38Q92620 1227 aaKnown RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 CCDC120Q96HB5 630 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 RCC1LQ96I51 464 aaKnown RBP3.66□□□□□ -1.82
YBX3-214ENST00000544501 KLHL25Q9H0H3 589 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 EPN3Q9H201 632 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 GFOD1Q9NXC2 390 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 SIRPGQ9P1W8 387 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 SUSD2Q9UGT4 822 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 DUSP13Q9UII6 198 aa3.66□□□□□ -1.82
YBX3-214ENST00000544501 DDAH1O94760 285 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 GJB6O95452 261 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 GSNP06396 782 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 ENDOUP21128 410 aaKnown RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 BMP8BP34820 402 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 GP2P55259 537 aaKnown RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 PCBP3P57721 371 aaKnown RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 ZP2Q05996 745 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 ZNF574Q6ZN55 896 aaPredicted RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 ADAT2Q7Z6V5 191 aaKnown RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 NBPF11Q86T75 865 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 CREG2Q8IUH2 290 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 ARHGEF39Q8N4T4 335 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 USHBP1Q8N6Y0 703 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 CELF2-AS1Q8N7Q2 184 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 MICAL1Q8TDZ2 1067 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 ZNF669Q96BR6 464 aaPredicted RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 TCTN2Q96GX1 697 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 APBA2Q99767 749 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 DSCC1Q9BVC3 393 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 CCDC113Q9H0I3 377 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 FAM86C1Q9NVL1 165 aa3.65□□□□□ -1.83
YBX3-214ENST00000544501 SF3B6Q9Y3B4 125 aaKnown RBP3.65□□□□□ -1.83
YBX3-214ENST00000544501 MSRB2Q9Y3D2 182 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 381.3 ms