RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 NYAP2Q9P242 653 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 HERC5Q9UII4 1024 aaKnown RBP22.82■■□□□ 1.24
COPS7A-218ENST00000543939 SHTN1A0MZ66 631 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 WNT10BO00744 389 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 AXDND1Q5T1B0 1012 aaPredicted RBP22.81■■□□□ 1.24
COPS7A-218ENST00000543939 TMEM179Q6ZVK1 233 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 FAM83AQ86UY5 434 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 GPKOWQ92917 476 aaPredicted RBP eCLIP22.81■■□□□ 1.24
COPS7A-218ENST00000543939 CPVLQ9H3G5 476 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 CLSTN2Q9H4D0 955 aa22.81■■□□□ 1.24
COPS7A-218ENST00000543939 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.81■■□□□ 1.24
COPS7A-218ENST00000543939 MYO1BO43795 1136 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 FAM177A1Q8N128 213 aaPredicted RBP22.8■■□□□ 1.24
COPS7A-218ENST00000543939 ENGASEQ8NFI3 743 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 RIOX1Q9H6W3 641 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 VEZTQ9HBM0 779 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 CABP5Q9NP86 173 aa22.8■■□□□ 1.24
COPS7A-218ENST00000543939 CALML3P27482 149 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 ZNF543Q08ER8 600 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 SEPT2Q15019 361 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 NBPF9Q3BBW0 867 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 EARS2Q5JPH6 523 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 CCDC73Q6ZRK6 1079 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 JMYQ8N9B5 988 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 FSIP1Q8NA03 581 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 MRPS27Q92552 414 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 RBSNQ9H1K0 784 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 TSPY26PQ9H489 355 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 BARHL2Q9NY43 387 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 DICER1Q9UPY3 1922 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 FRMPD2Q68DX3 1309 aaPredicted RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 FAM205CA6NFA0 338 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 STXBP3O00186 592 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 EEF2P13639 858 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 MARCKSP29966 332 aaPredicted RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 ATP2B2Q01814 1243 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 SNW1Q13573 536 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 RRP1BQ14684 758 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 TYW1BQ6NUM6 668 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 SIAH1Q8IUQ4 282 aa22.79■■□□□ 1.24
COPS7A-218ENST00000543939 RRP36Q96EU6 259 aaKnown RBP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.79■■□□□ 1.24
COPS7A-218ENST00000543939 GDF11O95390 407 aa22.78■■□□□ 1.24
COPS7A-218ENST00000543939 FAM160A1Q05DH4 1040 aa22.78■■□□□ 1.24
COPS7A-218ENST00000543939 DPF2Q92785 391 aa22.78■■□□□ 1.24
COPS7A-218ENST00000543939 UBA5Q9GZZ9 404 aa22.78■■□□□ 1.24
COPS7A-218ENST00000543939 PGAP2Q9UHJ9 254 aa22.78■■□□□ 1.24
COPS7A-218ENST00000543939 GMPSP49915 693 aaPredicted RBP22.77■■□□□ 1.24
COPS7A-218ENST00000543939 JAG1P78504 1218 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
COPS7A-218ENST00000543939 RBM43Q6ZSC3 357 aaKnown RBP22.77■■□□□ 1.24
COPS7A-218ENST00000543939 HEATR3Q7Z4Q2 680 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 CCDC148Q8NFR7 591 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 FUCA2Q9BTY2 467 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 PCDHA4Q9UN74 947 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 PCDHB6Q9Y5E3 794 aa22.77■■□□□ 1.24
COPS7A-218ENST00000543939 CMA1P23946 247 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 ICA1Q05084 483 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 CAMK4Q16566 473 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 MAP3K11Q16584 847 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 GPATCH4Q5T3I0 446 aaKnown RBP22.77■■□□□ 1.23
COPS7A-218ENST00000543939 GALNT17Q6IS24 598 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 BLIDQ8IZY5 108 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 DAGLBQ8NCG7 672 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 PIGSQ96S52 555 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 TMEM39BQ9GZU3 492 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 TNMDQ9H2S6 317 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 GPCPD1Q9NPB8 672 aa22.77■■□□□ 1.23
COPS7A-218ENST00000543939 ADAMTS3O15072 1205 aa22.76■■□□□ 1.23
COPS7A-218ENST00000543939 TBC1D12O60347 775 aa22.76■■□□□ 1.23
COPS7A-218ENST00000543939 NOM1Q5C9Z4 860 aaKnown RBP22.76■■□□□ 1.23
COPS7A-218ENST00000543939 FMR1NBQ8N0W7 255 aaPredicted RBP22.76■■□□□ 1.23
COPS7A-218ENST00000543939 SEC63Q9UGP8 760 aaKnown RBP22.76■■□□□ 1.23
COPS7A-218ENST00000543939 NOL7Q9UMY1 257 aaKnown RBP22.76■■□□□ 1.23
COPS7A-218ENST00000543939 MORC2Q9Y6X9 1032 aaPredicted RBP22.76■■□□□ 1.23
COPS7A-218ENST00000543939 M0R2N6 131 aa22.75■■□□□ 1.23
COPS7A-218ENST00000543939 GH2P01242 217 aa22.75■■□□□ 1.23
COPS7A-218ENST00000543939 VAT1LQ9HCJ6 419 aa22.75■■□□□ 1.23
COPS7A-218ENST00000543939 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 TRIM75PA6NK02 468 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 CUTAO60888 179 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 SBF1O95248 1867 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 EGFRP00533 1210 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 HOMER1Q86YM7 354 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 CDAN1Q8IWY9 1227 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 MICALL2Q8IY33 904 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 DCAF4Q8WV16 495 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 PANK2Q9BZ23 570 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 CEP131Q9UPN4 1083 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 GJA3Q9Y6H8 435 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 ZNF541Q9H0D2 1346 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 NDUFA8P51970 172 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 CCDC96Q2M329 555 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 CCDC12Q8WUD4 166 aaPredicted RBP22.74■■□□□ 1.23
COPS7A-218ENST00000543939 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
COPS7A-218ENST00000543939 ZMYND12Q9H0C1 365 aa22.74■■□□□ 1.23
COPS7A-218ENST00000543939 FAM237AA0A1B0GTK4 181 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 hCG_1984214I3L0E3 225 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms