RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GMCL1Q96IK5 515 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 PRC1O43663 620 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 FLOT1O75955 427 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 MCCP23508 829 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 GCLCP48506 637 aaPredicted RBP17.73■□□□□ 0.43
CD9-210ENST00000543916 COG2Q14746 738 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 CD99L2Q8TCZ2 262 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 TXNRD2Q9NNW7 524 aa17.73■□□□□ 0.43
CD9-210ENST00000543916 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
CD9-210ENST00000543916 CNMDO75829 334 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 BMP3P12645 472 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 DSG3P32926 999 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 MCM5P33992 734 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 KRT32Q14532 448 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
CD9-210ENST00000543916 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
CD9-210ENST00000543916 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 ATG4CQ96DT6 458 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 KAT14Q9H8E8 782 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 GPHNQ9NQX3 736 aaPredicted RBP17.72■□□□□ 0.43
CD9-210ENST00000543916 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
CD9-210ENST00000543916 PDHBP11177 359 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 CTGFP29279 349 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 SLC1A4P43007 532 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 LACTBP83111 547 aaPredicted RBP17.71■□□□□ 0.43
CD9-210ENST00000543916 FAM110CQ1W6H9 321 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 TMEM67Q5HYA8 995 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 KCTD1Q719H9 257 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 IGDCC4Q8TDY8 1250 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 GTF3C2Q8WUA4 911 aaPredicted RBP17.71■□□□□ 0.43
CD9-210ENST00000543916 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 ARHGAP39Q9C0H5 1083 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 BTBD7Q9P203 1132 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 PPP1R9AQ9ULJ8 1098 aa17.71■□□□□ 0.43
CD9-210ENST00000543916 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 ECM2O94769 699 aaPredicted RBP17.7■□□□□ 0.42
CD9-210ENST00000543916 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 CPA1P15085 419 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 WTAPQ15007 396 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 SART3Q15020 963 aaKnown RBP17.7■□□□□ 0.42
CD9-210ENST00000543916 CCDC96Q2M329 555 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
CD9-210ENST00000543916 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 LRRC2Q9BYS8 371 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 FEM1BQ9UK73 627 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
CD9-210ENST00000543916 ADAMTS5Q9UNA0 930 aa17.7■□□□□ 0.42
CD9-210ENST00000543916 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
CD9-210ENST00000543916 ERICH2A1L162 156 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 SH2B2O14492 632 aaPredicted RBP17.69■□□□□ 0.42
CD9-210ENST00000543916 ERVK-9P63128 1117 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 ERVK-24P63145 666 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 Q3C1V9 767 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 RABGAP1Q9Y3P9 1069 aa17.69■□□□□ 0.42
CD9-210ENST00000543916 PLXNB2O15031 1838 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 VWA5AO00534 786 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 STAT2P52630 851 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
CD9-210ENST00000543916 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
CD9-210ENST00000543916 PRPF38AQ8NAV1 312 aaKnown RBP17.68■□□□□ 0.42
CD9-210ENST00000543916 GPRC5AQ8NFJ5 357 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 TRIM47Q96LD4 638 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 GPCPD1Q9NPB8 672 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
CD9-210ENST00000543916 PLA2G6O60733 806 aa17.67■□□□□ 0.42
CD9-210ENST00000543916 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CD9-210ENST00000543916 PSMC4P43686 418 aa17.67■□□□□ 0.42
CD9-210ENST00000543916 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
CD9-210ENST00000543916 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
CD9-210ENST00000543916 FAM160B2Q86V87 743 aa17.67■□□□□ 0.42
CD9-210ENST00000543916 MB21D1Q8N884 522 aa17.67■□□□□ 0.42
CD9-210ENST00000543916 REPS2Q8NFH8 660 aa17.67■□□□□ 0.42
CD9-210ENST00000543916 HMGB1P09429 215 aaKnown RBP17.66■□□□□ 0.42
CD9-210ENST00000543916 GOLGA8HP0CJ92 632 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
CD9-210ENST00000543916 SLC16A2P36021 539 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 KIF22Q14807 665 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 TMEM132BQ14DG7 1078 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 BTNL9Q6UXG8 535 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 CHURC1Q8WUH1 139 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 PORCNQ9H237 461 aa17.66■□□□□ 0.42
CD9-210ENST00000543916 RPS6KB1P23443 525 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms