RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
PTPRO-209ENST00000543886 SWAP70Q9UH65 585 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 SERPINB13Q9UIV8 391 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CRKP46108 304 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 PTGDRQ13258 359 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 SLC35G1Q2M3R5 365 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 FAM177A1Q8N128 213 aaPredicted RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 OSBPL5Q9H0X9 879 aaPredicted RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 BARHL2Q9NY43 387 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 STXBP3O00186 592 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 HLA-DOAP06340 250 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 CHRNA5P30532 468 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 MCM7P33993 719 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 NOVP48745 357 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 MDM2Q00987 491 aaPredicted RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 EZH2Q15910 746 aaKnown RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 APOBEC3HQ6NTF7 200 aaKnown RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 USP49Q70CQ1 688 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 DAGLBQ8NCG7 672 aa19.47■□□□□ 0.71
PTPRO-209ENST00000543886 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
PTPRO-209ENST00000543886 CCDC194A0A1B0GVG4 234 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 IKBKBO14920 756 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 FOXN1O15353 648 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 ACTN4O43707 911 aaKnown RBP19.46■□□□□ 0.71
PTPRO-209ENST00000543886 ECE2O60344 883 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 STRIP1Q5VSL9 837 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 RASGRP2Q7LDG7 609 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 CCDC12Q8WUD4 166 aaPredicted RBP19.46■□□□□ 0.71
PTPRO-209ENST00000543886 SYMPKQ92797 1274 aaKnown RBP19.46■□□□□ 0.71
PTPRO-209ENST00000543886 RRP36Q96EU6 259 aaKnown RBP19.46■□□□□ 0.71
PTPRO-209ENST00000543886 MTMR4Q9NYA4 1195 aa19.46■□□□□ 0.71
PTPRO-209ENST00000543886 SEC63Q9UGP8 760 aaKnown RBP19.46■□□□□ 0.71
PTPRO-209ENST00000543886 VWA3AA6NCI4 1184 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 ADAMTS3O15072 1205 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 SMARCA1P28370 1054 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 FKBP1AP62942 108 aaKnown RBP19.45■□□□□ 0.7
PTPRO-209ENST00000543886 EN1Q05925 392 aaPredicted RBP19.45■□□□□ 0.7
PTPRO-209ENST00000543886 TYW1BQ6NUM6 668 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
PTPRO-209ENST00000543886 SMARCE1Q969G3 411 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 EPSTI1Q96J88 318 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 ZDHHC15Q96MV8 337 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 KCNQ5Q9NR82 932 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 MYO3BQ8WXR4 1341 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 AKR1B1P15121 316 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 KIAA0825Q8IV33 1275 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 DHX58Q96C10 678 aa19.45■□□□□ 0.7
PTPRO-209ENST00000543886 RASGRP4Q8TDF6 673 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 CAMKK2Q96RR4 588 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 CPVLQ9H3G5 476 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 MAN1B1Q9UKM7 699 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 RBM5P52756 815 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPRO-209ENST00000543886 NAPAP54920 295 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 MYL5Q02045 173 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 NOLC1Q14978 699 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPRO-209ENST00000543886 NCAPHQ15003 741 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 PCDHA6Q9UN73 950 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 PCDHA8Q9Y5H6 950 aa19.44■□□□□ 0.7
PTPRO-209ENST00000543886 M0R2N6 131 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 DACT2Q5SW24 774 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 NT5DC1Q5TFE4 455 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 GRAMD1CQ8IYS0 662 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 MRIQ9BWK5 157 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 DACH1Q9UI36 760 aa19.43■□□□□ 0.7
PTPRO-209ENST00000543886 IGKV6D-41A0A0C4DH26 115 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SMC2O95347 1197 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 TTLL1O95922 423 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SLFN14P0C7P3 912 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 PDHBP11177 359 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 HDLBPQ00341 1268 aaKnown RBP19.42■□□□□ 0.7
PTPRO-209ENST00000543886 ASPRV1Q53RT3 343 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 ARL6IP4Q66PJ3 421 aaKnown RBP19.42■□□□□ 0.7
PTPRO-209ENST00000543886 LRRC47Q8N1G4 583 aaKnown RBP19.42■□□□□ 0.7
PTPRO-209ENST00000543886 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 KIAA1524Q8TCG1 905 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 PYCARDQ9ULZ3 195 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 C10orf71Q711Q0 1435 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 A0A087X0B3 334 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SHMT1P34896 483 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 EIF6P56537 245 aaKnown RBP19.42■□□□□ 0.7
PTPRO-209ENST00000543886 NFIAQ12857 509 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 AOC3Q16853 763 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SOGA3Q5TF21 947 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 SUPT20HQ8NEM7 779 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 PYM1Q9BRP8 204 aaKnown RBP19.42■□□□□ 0.7
PTPRO-209ENST00000543886 ZMYND12Q9H0C1 365 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 EHD4Q9H223 541 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 VAT1LQ9HCJ6 419 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 C6orf50Q9HD87 102 aa19.42■□□□□ 0.7
PTPRO-209ENST00000543886 FRMPD2Q68DX3 1309 aaPredicted RBP19.41■□□□□ 0.7
PTPRO-209ENST00000543886 SARSP49591 514 aaKnown RBP19.41■□□□□ 0.7
PTPRO-209ENST00000543886 CCDC144BQ3MJ40 725 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms