RNA–Protein interactions for RNA: ENST00000543754.1

PUS1-209, Transcript of pseudouridylate synthase 1, humanhuman

TSL 2

Gene PUS1, Length 1,378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1-209ENST00000543754 TMX2Q9Y320 296 aa13.25□□□□□ -0.29
PUS1-209ENST00000543754 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
PUS1-209ENST00000543754 SEPT4O43236 478 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 MSCO60682 206 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 ADCYAP1R1P41586 468 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
PUS1-209ENST00000543754 TMEM179Q6ZVK1 233 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 BADQ92934 168 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 DCTPP1Q9H773 170 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 PRUNE2Q8WUY3 3088 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 MYH7P12883 1935 aa13.24□□□□□ -0.29
PUS1-209ENST00000543754 CDH23Q9H251 3354 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 STRNO43815 780 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 FLOT1O75955 427 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 PGK2P07205 417 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 CDK8P49336 464 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
PUS1-209ENST00000543754 ICA1Q05084 483 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 PLS1Q14651 629 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
PUS1-209ENST00000543754 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
PUS1-209ENST00000543754 TTYH1Q9H313 450 aaPredicted RBP13.23□□□□□ -0.29
PUS1-209ENST00000543754 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
PUS1-209ENST00000543754 USP17L21D6R901 530 aa13.22□□□□□ -0.29
PUS1-209ENST00000543754 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
PUS1-209ENST00000543754 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
PUS1-209ENST00000543754 LBHD1Q9BQE6 289 aaPredicted RBP13.22□□□□□ -0.29
PUS1-209ENST00000543754 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
PUS1-209ENST00000543754 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
PUS1-209ENST00000543754 ZNF214Q9UL59 606 aaPredicted RBP13.22□□□□□ -0.29
PUS1-209ENST00000543754 VCANP13611 3396 aa13.22□□□□□ -0.29
PUS1-209ENST00000543754 PGK1P00558 417 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
PUS1-209ENST00000543754 ZNF865P0CJ78 1059 aaPredicted RBP13.21□□□□□ -0.29
PUS1-209ENST00000543754 ATP5JP18859 108 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 TLE2Q04725 743 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 ZNF792Q3KQV3 632 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 C16orf86Q6ZW13 317 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 ABRAQ8N0Z2 381 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
PUS1-209ENST00000543754 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
PUS1-209ENST00000543754 MROH8Q9H579 483 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 PRDM5Q9NQX1 630 aaPredicted RBP13.21□□□□□ -0.29
PUS1-209ENST00000543754 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
PUS1-209ENST00000543754 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
PUS1-209ENST00000543754 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 HAUS7Q99871 368 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
PUS1-209ENST00000543754 KBTBD13C9JR72 458 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 VWA5AO00534 786 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 WDR46O15213 610 aaKnown RBP13.2□□□□□ -0.3
PUS1-209ENST00000543754 ADCY6O43306 1168 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
PUS1-209ENST00000543754 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 RIOX2Q8IUF8 465 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 FGD4Q96M96 766 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
PUS1-209ENST00000543754 MCM3APO60318 1980 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 MYADML2A6NDP7 307 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 ADAMTS4O75173 837 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 FCER1AP12319 257 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 C1orf53Q5VUE5 145 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 MYLIPQ8WY64 445 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 MMP19Q99542 508 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
PUS1-209ENST00000543754 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
PUS1-209ENST00000543754 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 SNAI1O95863 264 aaPredicted RBP13.18□□□□□ -0.3
PUS1-209ENST00000543754 RASA1P20936 1047 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 STAT3P40763 770 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
PUS1-209ENST00000543754 UBE3CQ15386 1083 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 ZNF697Q5TEC3 545 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 CCSAPQ6IQ19 270 aaPredicted RBP13.18□□□□□ -0.3
PUS1-209ENST00000543754 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.3
PUS1-209ENST00000543754 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 PRKAG2Q9UGJ0 569 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
PUS1-209ENST00000543754 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
PUS1-209ENST00000543754 GSG1L2A8MUP6 293 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms