RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 STAG1Q8WVM7 1258 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 ESR2Q92731 530 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 NEDD4P46934 1319 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 SGSM2O43147 1006 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 KDM4AO75164 1064 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 BMP3P12645 472 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 SLC1A4P43007 532 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 TRDNQ13061 729 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 CASC1Q6TDU7 716 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 MKL1Q969V6 931 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 NUDT12Q9BQG2 462 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 RAD50Q92878 1312 aa13.03□□□□□ -0.32
DDB1-222ENST00000543627 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 ZBED4O75132 1171 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 SNAP25P60880 206 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 UBXN2AP68543 259 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.33
DDB1-222ENST00000543627 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
DDB1-222ENST00000543627 ZMYM6O95789 1325 aa13.02□□□□□ -0.33
DDB1-222ENST00000543627 FGRP09769 529 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
DDB1-222ENST00000543627 ERCC3P19447 782 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 MTFR1Q15390 333 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 PRPF38AQ8NAV1 312 aaKnown RBP13.01□□□□□ -0.33
DDB1-222ENST00000543627 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 TMEM47Q9BQJ4 181 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 ESYT1Q9BSJ8 1104 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 KRT23Q9C075 422 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
DDB1-222ENST00000543627 MGAMO43451 1857 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
DDB1-222ENST00000543627 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
DDB1-222ENST00000543627 POTEFA5A3E0 1075 aa13□□□□□ -0.33
DDB1-222ENST00000543627 VWA5AO00534 786 aa13□□□□□ -0.33
DDB1-222ENST00000543627 INHAP05111 366 aa13□□□□□ -0.33
DDB1-222ENST00000543627 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
DDB1-222ENST00000543627 STAT3P40763 770 aa13□□□□□ -0.33
DDB1-222ENST00000543627 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
DDB1-222ENST00000543627 MB21D1Q8N884 522 aa13□□□□□ -0.33
DDB1-222ENST00000543627 GMCL1P1Q8NEA9 526 aa13□□□□□ -0.33
DDB1-222ENST00000543627 CHURC1Q8WUH1 139 aa13□□□□□ -0.33
DDB1-222ENST00000543627 ARMC5Q96C12 935 aa13□□□□□ -0.33
DDB1-222ENST00000543627 ZNF333Q96JL9 665 aa13□□□□□ -0.33
DDB1-222ENST00000543627 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
DDB1-222ENST00000543627 RNF208Q9H0X6 261 aa13□□□□□ -0.33
DDB1-222ENST00000543627 KAT14Q9H8E8 782 aa13□□□□□ -0.33
DDB1-222ENST00000543627 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
DDB1-222ENST00000543627 RAVER2Q9HCJ3 691 aaKnown RBP13□□□□□ -0.33
DDB1-222ENST00000543627 GJD2Q9UKL4 321 aa13□□□□□ -0.33
DDB1-222ENST00000543627 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
DDB1-222ENST00000543627 CENPFP49454 3210 aa13□□□□□ -0.33
DDB1-222ENST00000543627 CDC45O75419 566 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 CYP21A2P08686 494 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 CCL5P13501 91 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
DDB1-222ENST00000543627 PTPREP23469 700 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 SLC16A2P36021 539 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 RGS2P41220 211 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 STAT2P52630 851 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 SNRNP48Q6IEG0 339 aaKnown RBP12.99□□□□□ -0.33
DDB1-222ENST00000543627 TTBK2Q6IQ55 1244 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 CHST3Q7LGC8 479 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
DDB1-222ENST00000543627 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
DDB1-222ENST00000543627 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 GOLGA8HP0CJ92 632 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
DDB1-222ENST00000543627 TRIM32Q13049 653 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 IRF5Q13568 498 aa12.98□□□□□ -0.33
DDB1-222ENST00000543627 CCL14Q16627 93 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms