RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 NDUFB10O96000 172 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
VPS37B-204ENST00000543590 TFAP4Q01664 338 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
VPS37B-204ENST00000543590 SHCBP1Q8NEM2 672 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 MKL1Q969V6 931 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
VPS37B-204ENST00000543590 HMX1Q9NP08 348 aaPredicted RBP16.98■□□□□ 0.31
VPS37B-204ENST00000543590 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
VPS37B-204ENST00000543590 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 A0A0G2JMZ2 1700 aa16.98■□□□□ 0.31
VPS37B-204ENST00000543590 PARP14Q460N5 1801 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 TTLL1O95922 423 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 FGAP02671 866 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
VPS37B-204ENST00000543590 HSPD1P10809 573 aaKnown RBP16.97■□□□□ 0.31
VPS37B-204ENST00000543590 ERCC3P19447 782 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 GRB14Q14449 540 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 PLS1Q14651 629 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 UBE2Q1Q7Z7E8 422 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 CRISPLD2Q9H0B8 497 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 PPP1R9AQ9ULJ8 1098 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 TACC3Q9Y6A5 838 aa16.97■□□□□ 0.31
VPS37B-204ENST00000543590 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
VPS37B-204ENST00000543590 STRNO43815 780 aa16.96■□□□□ 0.31
VPS37B-204ENST00000543590 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
VPS37B-204ENST00000543590 CAPN2P17655 700 aa16.96■□□□□ 0.31
VPS37B-204ENST00000543590 TMEM132BQ14DG7 1078 aa16.96■□□□□ 0.31
VPS37B-204ENST00000543590 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
VPS37B-204ENST00000543590 VWA5AO00534 786 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 FARP2O94887 1054 aaPredicted RBP16.95■□□□□ 0.3
VPS37B-204ENST00000543590 HOXC6P09630 235 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 PDE4AP27815 886 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 CACNB2Q08289 660 aaPredicted RBP16.95■□□□□ 0.3
VPS37B-204ENST00000543590 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
VPS37B-204ENST00000543590 MROH8Q9H579 483 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 MYH4Q9Y623 1939 aa16.95■□□□□ 0.3
VPS37B-204ENST00000543590 TSPY2A6NKD2 308 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 ORC4O43929 436 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 FGRP09769 529 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 ADORA2AP29274 412 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
VPS37B-204ENST00000543590 GMCL1P1Q8NEA9 526 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 SLF1Q9BQI6 1058 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 FLRT1Q9NZU1 646 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 BRCA2P51587 3418 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 ZMYM6O95789 1325 aa16.94■□□□□ 0.3
VPS37B-204ENST00000543590 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
VPS37B-204ENST00000543590 SLC25A27O95847 323 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
VPS37B-204ENST00000543590 DPP9Q86TI2 863 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 IL17RBQ9NRM6 502 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
VPS37B-204ENST00000543590 COL11A1P12107 1806 aaPredicted RBP16.93■□□□□ 0.3
VPS37B-204ENST00000543590 HIP1O00291 1037 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 NMT2O60551 498 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 STAT3P40763 770 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 MFSD14CQ5VZR4 134 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 SLFN13Q68D06 897 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 RIOX2Q8IUF8 465 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 ABRAQ8N0Z2 381 aa16.93■□□□□ 0.3
VPS37B-204ENST00000543590 PRPF38AQ8NAV1 312 aaKnown RBP16.93■□□□□ 0.3
VPS37B-204ENST00000543590 COBLO75128 1261 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 FCER1AP12319 257 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 CCND3P30281 292 aaPredicted RBP16.92■□□□□ 0.3
VPS37B-204ENST00000543590 HAND2P61296 217 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 FEM1BQ9UK73 627 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
VPS37B-204ENST00000543590 ZNF236Q9UL36 1845 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 IGHA2P01877 340 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 BMP3P12645 472 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 RRP12Q5JTH9 1297 aaKnown RBP16.91■□□□□ 0.3
VPS37B-204ENST00000543590 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 ANKLE1Q8NAG6 615 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 KIFC2Q96AC6 838 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 HTATIP2Q9BUP3 242 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 NBPF3Q9H094 633 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 SLC5A4Q9NY91 659 aa16.91■□□□□ 0.3
VPS37B-204ENST00000543590 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
VPS37B-204ENST00000543590 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
VPS37B-204ENST00000543590 CYP2C19P33261 490 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 OLFML2BQ68BL8 750 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 DPF3Q92784 378 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
VPS37B-204ENST00000543590 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 OGDHLQ9ULD0 1010 aa16.9■□□□□ 0.3
VPS37B-204ENST00000543590 ZBED4O75132 1171 aa16.89■□□□□ 0.29
VPS37B-204ENST00000543590 MCCP23508 829 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms