RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SH3GLB2Q9NR46 395 aa15.86■□□□□ 0.13
MSH2-206ENST00000543555 MAD2L2Q9UI95 211 aa15.86■□□□□ 0.13
MSH2-206ENST00000543555 ADAMTS3O15072 1205 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 RASA1P20936 1047 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 FMR1Q06787 632 aaKnown RBP eCLIP15.85■□□□□ 0.136e-7■■■□□ 16.5
MSH2-206ENST00000543555 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 CCAR2Q8N163 923 aaKnown RBP15.85■□□□□ 0.13
MSH2-206ENST00000543555 TBC1D16Q8TBP0 767 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 ENOX1Q8TC92 643 aaKnown RBP15.85■□□□□ 0.13
MSH2-206ENST00000543555 POLLQ9UGP5 575 aa15.85■□□□□ 0.13
MSH2-206ENST00000543555 NYAP1Q6ZVC0 841 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 TEX11Q8IYF3 940 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 BLIDQ8IZY5 108 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 PAGE5Q96GU1 130 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 ZNF287Q9HBT7 754 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 PLCG2P16885 1265 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 MFSD14BQ5SR56 506 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 TSC1Q92574 1164 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 GPKOWQ92917 476 aaPredicted RBP eCLIP15.84■□□□□ 0.13
MSH2-206ENST00000543555 CRAMP1Q96RY5 1269 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 TMEM47Q9BQJ4 181 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 NFE2L3Q9Y4A8 694 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 AFMP43652 599 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
MSH2-206ENST00000543555 PCDHA4Q9UN74 947 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 PAXBP1Q9Y5B6 917 aa15.84■□□□□ 0.13
MSH2-206ENST00000543555 DDX60LQ5H9U9 1706 aaKnown RBP15.83■□□□□ 0.13
MSH2-206ENST00000543555 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 ZNF18P17022 549 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 MCM7P33993 719 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 CEP135Q66GS9 1140 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 C16orf86Q6ZW13 317 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 VSTM4Q8IW00 320 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 TBC1D22AQ8WUA7 517 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 MAP7D2Q96T17 732 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 FLT1P17948 1338 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 FAM205AQ6ZU69 1335 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
MSH2-206ENST00000543555 NRDCO43847 1150 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 KCNJ6P48051 423 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 RHBDL3P58872 404 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 PTPN14Q15678 1187 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 SLF2Q8IX21 1173 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.12
MSH2-206ENST00000543555 GAKO14976 1311 aa15.83■□□□□ 0.12
MSH2-206ENST00000543555 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 PALM3A6NDB9 673 aaPredicted RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 CYTH3O43739 400 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 CDK8P49336 464 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 TYW1BQ6NUM6 668 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 TRMT44Q8IYL2 757 aaKnown RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 MED15Q96RN5 788 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 CDK5RAP2Q96SN8 1893 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 C6orf229H3BNL8 230 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 DPYDQ12882 1025 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 E4F1Q66K89 784 aaPredicted RBP15.82■□□□□ 0.12
MSH2-206ENST00000543555 EYA3Q99504 573 aa15.82■□□□□ 0.12
MSH2-206ENST00000543555 M0R2N6 131 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 IL17AQ16552 155 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 LTBP1Q14766 1721 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 CTIFO43310 598 aaKnown RBP15.81■□□□□ 0.12
MSH2-206ENST00000543555 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
MSH2-206ENST00000543555 E2F4Q16254 413 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 HSP90AA4PQ58FG1 418 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 ARL6IP4Q66PJ3 421 aaKnown RBP15.81■□□□□ 0.12
MSH2-206ENST00000543555 MTERF4Q7Z6M4 381 aaKnown RBP15.81■□□□□ 0.12
MSH2-206ENST00000543555 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 NEDD1Q8NHV4 660 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 GSDMAQ96QA5 445 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 LZTS2Q9BRK4 669 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 MTMR7Q9Y216 660 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 LRRC37AA6NMS7 1700 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 CASP1P29466 404 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 C4orf32Q8N8J7 132 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 DAGLBQ8NCG7 672 aa15.81■□□□□ 0.12
MSH2-206ENST00000543555 PYM1Q9BRP8 204 aaKnown RBP15.81■□□□□ 0.12
MSH2-206ENST00000543555 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
MSH2-206ENST00000543555 GALNT17Q6IS24 598 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 BARHL2Q9NY43 387 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 STXBP3O00186 592 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
MSH2-206ENST00000543555 HEATR3Q7Z4Q2 680 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 SP8Q8IXZ3 490 aa15.8■□□□□ 0.12
MSH2-206ENST00000543555 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms