RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 UBXN2AP68543 259 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
COPS7A-217ENST00000543537 MTFR1Q15390 333 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 CCDC178Q5BJE1 867 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 C12orf60Q5U649 245 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
COPS7A-217ENST00000543537 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 IFNL3Q8IZI9 196 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 ANAPC4Q9UJX5 808 aa13.42□□□□□ -0.26
COPS7A-217ENST00000543537 ADCY3O60266 1144 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 GJA8P48165 433 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 ADCK5Q3MIX3 580 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 POTEEQ6S8J3 1075 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 TMEM179Q6ZVK1 233 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 SLC4A4Q9Y6R1 1079 aa13.41□□□□□ -0.26
COPS7A-217ENST00000543537 ERICH2A1L162 156 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 PRKAB2O43741 272 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 CHGBP05060 677 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
COPS7A-217ENST00000543537 CCL5P13501 91 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 VCAM1P19320 739 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 MCM4P33991 863 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 TDO2P48775 406 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 EVX2Q03828 476 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 SYNE3Q6ZMZ3 975 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 CATSPERGQ6ZRH7 1159 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 MFSD6Q6ZSS7 791 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
COPS7A-217ENST00000543537 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 USP17L21D6R901 530 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 CDKL5O76039 1030 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 CYP2D6P10635 497 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 MAPK4P31152 587 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 LIFRP42702 1097 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 ERVK-9P63128 1117 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 ERVK-24P63145 666 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 SEPT2Q15019 361 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 SLC44A5Q8NCS7 719 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 USP6NLQ92738 828 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 FEZ1Q99689 392 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-217ENST00000543537 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-217ENST00000543537 RABGAP1Q9Y3P9 1069 aa13.39□□□□□ -0.27
COPS7A-217ENST00000543537 ROBO3Q96MS0 1386 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 GSG1L2A8MUP6 293 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 PFKFB2O60825 505 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-217ENST00000543537 SLC34A2O95436 690 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 INHAP05111 366 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 CDK8P49336 464 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 Q3C1V9 767 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 Q6ZUG5 572 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 LPAR1Q92633 364 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 ESR2Q92731 530 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
COPS7A-217ENST00000543537 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
COPS7A-217ENST00000543537 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
COPS7A-217ENST00000543537 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 CNMDO75829 334 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 SGPL1O95470 568 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 BRD1O95696 1058 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 HMGCRP04035 888 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 ELNP15502 786 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 PDE4BQ07343 736 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
COPS7A-217ENST00000543537 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
COPS7A-217ENST00000543537 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-217ENST00000543537 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
COPS7A-217ENST00000543537 AKR1B1P15121 316 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms