RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 F5H6K3 240 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FARP2O94887 1054 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TFRCP02786 760 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZKSCAN1P17029 563 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 KLRC3Q07444 240 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TMEM132BQ14DG7 1078 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ALX1Q15699 326 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NEDD1Q8NHV4 660 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CEP95Q96GE4 821 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NAPBQ9H115 298 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 GOPCQ9HD26 462 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 INCENPQ9NQS7 918 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
TNFRSF1A-215ENST00000543359 MYH4Q9Y623 1939 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNF236Q9UL36 1845 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NDUFB10O96000 172 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FGRP09769 529 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ERCC3P19447 782 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FAM83BQ5T0W9 1011 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 LHX8Q68G74 356 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNF444Q8N0Y2 327 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NPLOC4Q8TAT6 608 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NUP88Q99567 741 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNF287Q9HBT7 754 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 OGDHLQ9ULD0 1010 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PPP1R9AQ9ULJ8 1098 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TRIOBPQ9H2D6 2365 aa15.62■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNFX1Q9P2E3 1918 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 LAMA3Q16787 3333 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 VWA5AO00534 786 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 STRNO43815 780 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CCND3P30281 292 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PDE4BQ07343 736 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NMIQ13287 307 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 MCMDC2Q4G0Z9 681 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FAM47AQ5JRC9 791 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 WDR78Q5VTH9 848 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNF589Q86UQ0 364 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 MROH8Q9H579 483 aa15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ZNF214Q9UL59 606 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-215ENST00000543359 H0YGN5 161 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 COBLO75128 1261 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FGAP02671 866 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ADORA2AP29274 412 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TFAP4Q01664 338 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CTDSPL2Q05D32 466 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ABRAQ8N0Z2 381 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ANKLE1Q8NAG6 615 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 DIS3LQ8TF46 1054 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 SYNPO2Q9UMS6 1093 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 IVNS1ABPQ9Y6Y0 642 aa15.6■□□□□ 0.09
TNFRSF1A-215ENST00000543359 ALPK3Q96L96 1907 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TTLL1O95922 423 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 SLC3A2P08195 630 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TSPY3P0CV98 308 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TSPY8P0CW00 308 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 HSPD1P10809 573 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NOVP48745 357 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 RIOX2Q8IUF8 465 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 SLF1Q9BQI6 1058 aa15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CWC22Q9HCG8 908 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SLC25A27O95847 323 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SDSP20132 328 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PDE4AP27815 886 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 STAT3P40763 770 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PLS1Q14651 629 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 OLFML2BQ68BL8 750 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 LRRC47Q8N1G4 583 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 NBPF3Q9H094 633 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ZMYM6O95789 1325 aa15.58■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ORC4O43929 436 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RAD21O60216 631 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SLC34A2O95436 690 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 CYP2C19P33261 490 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 NECAB2Q7Z6G3 386 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DPP9Q86TI2 863 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 NCAPG2Q86XI2 1143 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 PRPF38AQ8NAV1 312 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 DPF3Q92784 378 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 HTATIP2Q9BUP3 242 aa15.57■□□□□ 0.08
TNFRSF1A-215ENST00000543359 ATP2A1O14983 1001 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 NMT2O60551 498 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 COL6A1P12109 1028 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 CYBAP13498 195 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 MFSD14CQ5VZR4 134 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 SLC38A10Q9HBR0 1119 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 RIPK3Q9Y572 518 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 CCDC171Q6TFL3 1326 aa15.56■□□□□ 0.08
TNFRSF1A-215ENST00000543359 FRMPD3Q5JV73 1810 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms