RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 PI4KAP2A4QPH2 592 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 THBS1P07996 1170 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 ANGEL2Q5VTE6 544 aaKnown RBP12.86□□□□□ -0.35
RFC5-209ENST00000543153 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 PI4KAP1Q8N8J0 262 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
RFC5-209ENST00000543153 PDGFAP04085 211 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 ERCC3P19447 782 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 TNP2Q05952 138 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 CWF19L2Q2TBE0 894 aaKnown RBP12.85□□□□□ -0.35
RFC5-209ENST00000543153 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
RFC5-209ENST00000543153 CDCA5Q96FF9 252 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 MCOLN1Q9GZU1 580 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
RFC5-209ENST00000543153 ATXN7L1Q9ULK2 861 aaPredicted RBP12.85□□□□□ -0.35
RFC5-209ENST00000543153 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
RFC5-209ENST00000543153 BNIP3LO60238 219 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 KIF23Q02241 960 aaPredicted RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 MLLT1Q03111 559 aaPredicted RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 EHHADHQ08426 723 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
RFC5-209ENST00000543153 UBE3BQ7Z3V4 1068 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 GREM2Q9H772 168 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
RFC5-209ENST00000543153 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 TRPA1O75762 1119 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 KCNJ4P48050 445 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
RFC5-209ENST00000543153 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
RFC5-209ENST00000543153 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
RFC5-209ENST00000543153 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 EFSO43281 561 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
RFC5-209ENST00000543153 TTLL11Q8NHH1 800 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
RFC5-209ENST00000543153 FAM155AB1AL88 458 aaPredicted RBP12.81□□□□□ -0.36
RFC5-209ENST00000543153 NF2P35240 595 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 DMRTB1Q96MA1 342 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 NDFIP2Q9NV92 336 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 SCAF8Q9UPN6 1271 aaKnown RBP12.81□□□□□ -0.36
RFC5-209ENST00000543153 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
RFC5-209ENST00000543153 ZNF609O15014 1411 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 FKBP1BP68106 108 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 SFSWAPQ12872 951 aaKnown RBP12.8□□□□□ -0.36
RFC5-209ENST00000543153 GJD3Q8N144 294 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
RFC5-209ENST00000543153 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
RFC5-209ENST00000543153 SASH1O94885 1247 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 GCKRQ14397 625 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 G2E3Q7L622 706 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 RASAL3Q86YV0 1011 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 GMLQ99445 158 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 RNF186Q9NXI6 227 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 LEMD3Q9Y2U8 911 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
RFC5-209ENST00000543153 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 H3BM21 787 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 GPR25O00155 361 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 XYLBO75191 536 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 FGFR3P22607 806 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 DACT2Q5SW24 774 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 TMC7Q7Z402 723 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
RFC5-209ENST00000543153 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
RFC5-209ENST00000543153 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 NEFLP07196 543 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 CCINQ13939 588 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 PRKG1Q13976 671 aa12.77□□□□□ -0.37
RFC5-209ENST00000543153 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms