RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 HOXD10P28358 340 aa8.83□□□□□ -1
LRP6-206ENST00000543091 RCAN1P53805 252 aa8.83□□□□□ -1
LRP6-206ENST00000543091 TTC38Q5R3I4 469 aa8.83□□□□□ -1
LRP6-206ENST00000543091 RCSD1Q6JBY9 416 aa8.83□□□□□ -1
LRP6-206ENST00000543091 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
LRP6-206ENST00000543091 CEP95Q96GE4 821 aa8.83□□□□□ -1
LRP6-206ENST00000543091 TMEM47Q9BQJ4 181 aa8.83□□□□□ -1
LRP6-206ENST00000543091 GBA2Q9HCG7 927 aaPredicted RBP8.83□□□□□ -1
LRP6-206ENST00000543091 CNPY2Q9Y2B0 182 aa8.83□□□□□ -1
LRP6-206ENST00000543091 ME3Q16798 604 aa8.83□□□□□ -1
LRP6-206ENST00000543091 TBC1D10CQ8IV04 446 aa8.83□□□□□ -1
LRP6-206ENST00000543091 VGLL2Q8N8G2 317 aa8.83□□□□□ -1
LRP6-206ENST00000543091 ZNF280CQ8ND82 737 aa8.83□□□□□ -1
LRP6-206ENST00000543091 RTN4Q9NQC3 1192 aaKnown RBP8.83□□□□□ -1
LRP6-206ENST00000543091 GPRC5DQ9NZD1 345 aa8.83□□□□□ -1
LRP6-206ENST00000543091 PKD2L1Q9P0L9 805 aa8.83□□□□□ -1
LRP6-206ENST00000543091 GLI3P10071 1580 aa8.83□□□□□ -1
LRP6-206ENST00000543091 FMNL1O95466 1100 aaPredicted RBP8.82□□□□□ -1
LRP6-206ENST00000543091 AKR1B1P15121 316 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SYKP43405 635 aa8.82□□□□□ -1
LRP6-206ENST00000543091 PRPF38AQ8NAV1 312 aaKnown RBP8.82□□□□□ -1
LRP6-206ENST00000543091 GTPBP4Q9BZE4 634 aaKnown RBP8.82□□□□□ -1
LRP6-206ENST00000543091 TSPY26PQ9H489 355 aa8.82□□□□□ -1
LRP6-206ENST00000543091 F5H6K3 240 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SOCS7O14512 581 aa8.82□□□□□ -1
LRP6-206ENST00000543091 CCNT1O60563 726 aaKnown RBP8.82□□□□□ -1
LRP6-206ENST00000543091 KLRC3Q07444 240 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SREBF2Q12772 1141 aa8.82□□□□□ -1
LRP6-206ENST00000543091 RRAGBQ5VZM2 374 aa8.82□□□□□ -1
LRP6-206ENST00000543091 MRPS27Q92552 414 aaKnown RBP8.82□□□□□ -1
LRP6-206ENST00000543091 COA7Q96BR5 231 aa8.82□□□□□ -1
LRP6-206ENST00000543091 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
LRP6-206ENST00000543091 RMND1Q9NWS8 449 aa8.82□□□□□ -1
LRP6-206ENST00000543091 NYAP2Q9P242 653 aa8.82□□□□□ -1
LRP6-206ENST00000543091 ZBTB21Q9ULJ3 1066 aa8.82□□□□□ -1
LRP6-206ENST00000543091 CETPP11597 493 aa8.82□□□□□ -1
LRP6-206ENST00000543091 IFNAR1P17181 557 aa8.82□□□□□ -1
LRP6-206ENST00000543091 YY1P25490 414 aa8.82□□□□□ -1
LRP6-206ENST00000543091 UBE2HP62256 183 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SPDYE2Q495Y8 402 aa8.82□□□□□ -1
LRP6-206ENST00000543091 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SMTNL1A8MU46 457 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SLC16A2P36021 539 aa8.82□□□□□ -1
LRP6-206ENST00000543091 ZNF174Q15697 407 aa8.82□□□□□ -1
LRP6-206ENST00000543091 FAM83BQ5T0W9 1011 aa8.82□□□□□ -1
LRP6-206ENST00000543091 KRI1Q8N9T8 703 aaKnown RBP8.82□□□□□ -1
LRP6-206ENST00000543091 CDHR1Q96JP9 859 aa8.82□□□□□ -1
LRP6-206ENST00000543091 PANK2Q9BZ23 570 aa8.82□□□□□ -1
LRP6-206ENST00000543091 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
LRP6-206ENST00000543091 SCN11AQ9UI33 1791 aa8.82□□□□□ -1
LRP6-206ENST00000543091 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
LRP6-206ENST00000543091 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 CNGA1P29973 690 aa8.81□□□□□ -1
LRP6-206ENST00000543091 PLCD1P51178 756 aa8.81□□□□□ -1
LRP6-206ENST00000543091 TAF1CQ15572 869 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 CDC37Q16543 378 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
LRP6-206ENST00000543091 SYCP3Q8IZU3 236 aa8.81□□□□□ -1
LRP6-206ENST00000543091 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 MLXIPQ9HAP2 919 aa8.81□□□□□ -1
LRP6-206ENST00000543091 KCNJ14Q9UNX9 436 aa8.81□□□□□ -1
LRP6-206ENST00000543091 RGPD1P0DJD0 1748 aa8.81□□□□□ -1
LRP6-206ENST00000543091 WDR46O15213 610 aaKnown RBP8.81□□□□□ -1
LRP6-206ENST00000543091 LIG1P18858 919 aa8.81□□□□□ -1
LRP6-206ENST00000543091 MARCKSP29966 332 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 HMGCS2P54868 508 aa8.81□□□□□ -1
LRP6-206ENST00000543091 SCYL3Q8IZE3 742 aa8.81□□□□□ -1
LRP6-206ENST00000543091 SMARCE1Q969G3 411 aa8.81□□□□□ -1
LRP6-206ENST00000543091 PARK7Q99497 189 aaKnown RBP8.81□□□□□ -1
LRP6-206ENST00000543091 ANO10Q9NW15 660 aa8.81□□□□□ -1
LRP6-206ENST00000543091 GLTPD2A6NH11 291 aa8.81□□□□□ -1
LRP6-206ENST00000543091 WNT10BO00744 389 aa8.81□□□□□ -1
LRP6-206ENST00000543091 ERO1BQ86YB8 467 aa8.81□□□□□ -1
LRP6-206ENST00000543091 CMTR1Q8N1G2 835 aaKnown RBP8.81□□□□□ -1
LRP6-206ENST00000543091 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
LRP6-206ENST00000543091 PDGFDQ9GZP0 370 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 JAK2O60674 1132 aa8.81□□□□□ -1
LRP6-206ENST00000543091 SYCP1Q15431 976 aa8.81□□□□□ -1
LRP6-206ENST00000543091 PRAMEF18Q5VWM3 479 aa8.81□□□□□ -1
LRP6-206ENST00000543091 APBB1IPQ7Z5R6 666 aaPredicted RBP8.81□□□□□ -1
LRP6-206ENST00000543091 IQUBQ8NA54 791 aa8.81□□□□□ -1
LRP6-206ENST00000543091 SMC1BQ8NDV3 1235 aa8.81□□□□□ -1
LRP6-206ENST00000543091 PIGSQ96S52 555 aa8.81□□□□□ -1
LRP6-206ENST00000543091 EXOC1Q9NV70 894 aa8.81□□□□□ -1
LRP6-206ENST00000543091 NEDD4P46934 1319 aa8.81□□□□□ -1
LRP6-206ENST00000543091 GAS7O60861 476 aa8.8□□□□□ -1
LRP6-206ENST00000543091 CALCRLQ16602 461 aa8.8□□□□□ -1
LRP6-206ENST00000543091 CCDC183Q5T5S1 534 aa8.8□□□□□ -1
LRP6-206ENST00000543091 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
LRP6-206ENST00000543091 GPKOWQ92917 476 aaPredicted RBP eCLIP8.8□□□□□ -1
LRP6-206ENST00000543091 BICD1Q96G01 975 aa8.8□□□□□ -1
LRP6-206ENST00000543091 EHD4Q9H223 541 aa8.8□□□□□ -1
LRP6-206ENST00000543091 PRPF3O43395 683 aaKnown RBP8.8□□□□□ -1
LRP6-206ENST00000543091 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
LRP6-206ENST00000543091 COG2Q14746 738 aa8.8□□□□□ -1
LRP6-206ENST00000543091 ANO1Q5XXA6 986 aa8.8□□□□□ -1
LRP6-206ENST00000543091 NEK8Q86SG6 692 aa8.8□□□□□ -1
LRP6-206ENST00000543091 ENAHQ8N8S7 591 aaPredicted RBP8.8□□□□□ -1
LRP6-206ENST00000543091 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
LRP6-206ENST00000543091 MTMR4Q9NYA4 1195 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms