RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 PLS1Q14651 629 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 SKIV2LQ15477 1246 aaKnown RBP11.51□□□□□ -0.57
C2CD3-219ENST00000542930 KCNA10Q16322 511 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 CCSAPQ6IQ19 270 aaPredicted RBP11.51□□□□□ -0.57
C2CD3-219ENST00000542930 KLHDC9Q8NEP7 349 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 IL23AQ9NPF7 189 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 COG5Q9UP83 839 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 DIS3Q9Y2L1 958 aaKnown RBP11.51□□□□□ -0.57
C2CD3-219ENST00000542930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.51□□□□□ -0.57
C2CD3-219ENST00000542930 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
C2CD3-219ENST00000542930 APBB1O00213 710 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 TLL1O43897 1013 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 FGBP02675 491 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 POU3F3P20264 500 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-219ENST00000542930 DSG3P32926 999 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-219ENST00000542930 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 SYNRGQ9UMZ2 1314 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 CDK5RAP2Q96SN8 1893 aa11.5□□□□□ -0.57
C2CD3-219ENST00000542930 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 SLC25A27O95847 323 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 ZNF792Q3KQV3 632 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 TTC6Q86TZ1 520 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
C2CD3-219ENST00000542930 MMP19Q99542 508 aa11.49□□□□□ -0.57
C2CD3-219ENST00000542930 A0A0U1RQG5 324 aaPredicted RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 FAM86C2PA6NEL3 165 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 PI4K2BG5E9Z4 385 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 SMIM22K7EJ46 135 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 ARVCFO00192 962 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 TLR3O15455 904 aaKnown RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 SRGAP3O43295 1099 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 GTPBP6O43824 516 aaPredicted RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 PGK2P07205 417 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 CST5P28325 142 aaPredicted RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 SHMT1P34896 483 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 USP5P45974 858 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 MRE11P49959 708 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 SEPT2Q15019 361 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
C2CD3-219ENST00000542930 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 CDCA7LQ96GN5 454 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 PCDHA11Q9Y5I1 949 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 MTCH2Q9Y6C9 303 aa11.48□□□□□ -0.57
C2CD3-219ENST00000542930 PRRC2BQ5JSZ5 2229 aaKnown RBP11.47□□□□□ -0.57
C2CD3-219ENST00000542930 PRR33A8MZF0 331 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 DUSP11O75319 330 aaKnown RBP11.47□□□□□ -0.57
C2CD3-219ENST00000542930 FLOT1O75955 427 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 ASGR1P07306 291 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 CYP2C18P33260 490 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 RABGGTBP53611 331 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 MTX1Q13505 466 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 KCTD2Q14681 263 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 TMEM132BQ14DG7 1078 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 MSL3Q8N5Y2 521 aaKnown RBP11.47□□□□□ -0.57
C2CD3-219ENST00000542930 HLA-CQ95604 372 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 VTI1AQ96AJ9 217 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 SLC4A7Q9Y6M7 1214 aa11.47□□□□□ -0.57
C2CD3-219ENST00000542930 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
C2CD3-219ENST00000542930 GBF1Q92538 1859 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 MYADML2A6NDP7 307 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 CD4P01730 458 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 MYOGP15173 224 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 PLCD1P51178 756 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 KIAA1755Q5JYT7 1200 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
C2CD3-219ENST00000542930 MYH1P12882 1939 aa11.46□□□□□ -0.58
C2CD3-219ENST00000542930 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.58
C2CD3-219ENST00000542930 C6orf222P0C671 652 aaPredicted RBP11.45□□□□□ -0.58
C2CD3-219ENST00000542930 CYP7A1P22680 504 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 CCDC158Q5M9N0 1113 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 MEIS3Q99687 375 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 HIPK3Q9H422 1215 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 SPC25Q9HBM1 224 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 ZHX1Q9UKY1 873 aaPredicted RBP11.45□□□□□ -0.58
C2CD3-219ENST00000542930 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
C2CD3-219ENST00000542930 RFXAPO00287 272 aa11.44□□□□□ -0.58
C2CD3-219ENST00000542930 MPHOSPH10O00566 681 aaKnown RBP11.44□□□□□ -0.58
C2CD3-219ENST00000542930 SNAI1O95863 264 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-219ENST00000542930 ATP2A2P16615 1042 aaKnown RBP11.44□□□□□ -0.58
C2CD3-219ENST00000542930 COPB2P35606 906 aa11.44□□□□□ -0.58
C2CD3-219ENST00000542930 STAT3P40763 770 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms