RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 TMED8Q6PL24 325 aaPredicted RBP15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 BLIDQ8IZY5 108 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 MTRQ99707 1265 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 BLZF1Q9H2G9 400 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 FLT1P17948 1338 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 GPR75-ASB3A0A0A6YYF3 556 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 POLRMTO00411 1230 aaKnown RBP15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 CBFA2T2O43439 604 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 TRIM37O94972 964 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 E2F4Q16254 413 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 TRIML1Q8N9V2 468 aa15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 ENOX1Q8TC92 643 aaKnown RBP15.58■□□□□ 0.08
SLC3A2-220ENST00000542922 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 M0R2N6 131 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 BMP15O95972 392 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 LDHCP07864 332 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 CDK8P49336 464 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
SLC3A2-220ENST00000542922 C6orf229H3BNL8 230 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 TOP1P11387 765 aaKnown RBP15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 AMOTL1Q8IY63 956 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 EYA3Q99504 573 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 KCND1Q9NSA2 647 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 TRPC5Q9UL62 973 aaPredicted RBP15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 LRRC37AA6NMS7 1700 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 PP2D1A8MPX8 630 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 STXBP3O00186 592 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 NCBP1Q09161 790 aaKnown RBP15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 CUL4BQ13620 913 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 PDXDC2PQ6P474 469 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 C16orf86Q6ZW13 317 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 CCDC112Q8NEF3 446 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 TMEM60Q9H2L4 133 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 TCP11L1Q9NUJ3 509 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 PCDHA6Q9UN73 950 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
SLC3A2-220ENST00000542922 FOCADQ5VW36 1801 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 TRAPPC10P48553 1259 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 TMEM139Q8IV31 216 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 PROM2Q8N271 834 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 MXD3Q9BW11 206 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 DACH1Q9UI36 760 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 PAXBP1Q9Y5B6 917 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 CALML3P27482 149 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 GTF2IP78347 998 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 INF2Q27J81 1249 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 CEP95Q96GE4 821 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 TMX1Q9H3N1 280 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 SYNRGQ9UMZ2 1314 aa15.55■□□□□ 0.08
SLC3A2-220ENST00000542922 PPP1R3GB7ZBB8 358 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 TBX2Q13207 712 aaPredicted RBP15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 APTXQ7Z2E3 356 aaKnown RBP15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 HOMER1Q86YM7 354 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 CLEC10AQ8IUN9 316 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 SH3GLB2Q9NR46 395 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 DAGLAQ9Y4D2 1042 aa15.54■□□□□ 0.08
SLC3A2-220ENST00000542922 GAKO14976 1311 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 TEX33O43247 280 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 MYO1BO43795 1136 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 BBOX1O75936 387 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 ERCC5P28715 1186 aaPredicted RBP15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 ADKP55263 362 aaKnown RBP15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 PICALMQ13492 652 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 BARHL2Q9NY43 387 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 CERS5Q8N5B7 392 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 MAP7D2Q96T17 732 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 CTNND2Q9UQB3 1225 aa15.53■□□□□ 0.08
SLC3A2-220ENST00000542922 CCDC194A0A1B0GVG4 234 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 GNAQP50148 359 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 SYT10Q6XYQ8 523 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 TC2NQ8N9U0 490 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 IQUBQ8NA54 791 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 LRRC15Q8TF66 581 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 GSDMAQ96QA5 445 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 PLIN2Q99541 437 aa15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 V9GYY5 206 aaPredicted RBP15.52■□□□□ 0.08
SLC3A2-220ENST00000542922 FANCGO15287 622 aa15.52■□□□□ 0.07
SLC3A2-220ENST00000542922 SLURP2P0DP57 97 aa15.52■□□□□ 0.07
SLC3A2-220ENST00000542922 KCNJ6P48051 423 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms