RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ZNF214Q9UL59 606 aaPredicted RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 TACC3Q9Y6A5 838 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 SHTN1A0MZ66 631 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 WISP1O95388 367 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 SCGB1D2O95969 90 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 TGFB1P01137 390 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 NAT2P11245 290 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 SDSP20132 328 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 CDC27P30260 824 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 ZNF143P52747 638 aaPredicted RBP5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 UBE4AQ14139 1066 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 MAP7Q14244 749 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 LRRC41Q15345 812 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 TMEM201Q5SNT2 666 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 YOD1Q5VVQ6 348 aaPredicted RBP5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 TMED8Q6PL24 325 aaPredicted RBP5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 ACAD11Q709F0 780 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 STRA8Q7Z7C7 330 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 ARMC10Q8N2F6 343 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 PPM1KQ8N3J5 372 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 KLHL23Q8NBE8 558 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 ELMO3Q96BJ8 720 aa5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
SFSWAP-211ENST00000542813 H3BRJ5 948 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 SOX1O00570 391 aaPredicted RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 TM4SF5O14894 197 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 CREB3O43889 395 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 EYA4O95677 639 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 KRT18P05783 430 aaKnown RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 RAG1P15918 1043 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 ATF3P18847 181 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 EPHA1P21709 976 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 IRAK1P51617 712 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 NEK2P51955 445 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 GSTM4Q03013 218 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 NFIAQ12857 509 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 HSP90AA2PQ14568 343 aaPredicted RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 BBS9Q3SYG4 887 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 FAM117BQ6P1L5 589 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 TXNDC11Q6PKC3 985 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 DDX46Q7L014 1031 aaKnown RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 NECAB2Q7Z6G3 386 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 SCUBE1Q8IWY4 988 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 UTP4Q969X6 686 aaKnown RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 SMAD5Q99717 465 aaKnown RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 APBA2Q99767 749 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 CORO1BQ9BR76 489 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 SOX17Q9H6I2 414 aaPredicted RBP5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 PRDM16Q9HAZ2 1276 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 KRT82Q9NSB4 513 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 KCNK4Q9NYG8 393 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 SFMBT1Q9UHJ3 866 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 ERCC6Q03468 1493 aa5.17□□□□□ -1.58
SFSWAP-211ENST00000542813 PRAMEF27A3QJZ7 478 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 ANKRD34BA5PLL1 514 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 FSCN2O14926 492 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 EIF4EBP3O60516 100 aaPredicted RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 MED26O95402 600 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 CYP11A1P05108 521 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 PGRP06401 933 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 POLR2BP30876 1174 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 GRIK1P39086 918 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 TXKP42681 527 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 RAB27AP51159 221 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 GP2P55259 537 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 PPP2R2AP63151 447 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 SUMO1P63165 101 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 HNRNPUQ00839 825 aaKnown RBP eCLIP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 STRN3Q13033 797 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 OS9Q13438 667 aaPredicted RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 DUOXA2Q1HG44 320 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 INTS5Q6P9B9 1019 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 CYFIP1Q7L576 1253 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 ZDHHC13Q8IUH4 622 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 MYO1HQ8N1T3 1032 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 DDX1Q92499 740 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 FAM46AQ96IP4 442 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 CCDC86Q9H6F5 360 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 ZIM2Q9NZV7 527 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 LRP2BPQ9P2M1 347 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 ADAM30Q9UKF2 790 aa5.16□□□□□ -1.58
SFSWAP-211ENST00000542813 DCDC2CA8MYV0 355 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 CHURC1-FNTBB4DL54 471 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 AKAP10O43572 662 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 DNAJC8O75937 253 aaPredicted RBP5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 ECEL1O95672 775 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 CDC25BP30305 580 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 GRK4P32298 578 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 PMS1P54277 932 aaKnown RBP5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 MTMR1Q13613 665 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 POU4F3Q15319 338 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 RNF43Q68DV7 783 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 TSHZ1Q6ZSZ6 1077 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 KIAA1211Q6ZU35 1233 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 CHPFQ8IZ52 775 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 AHI1Q8N157 1196 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 WDR66Q8TBY9 1149 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms