RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 PTPDC1A2A3K4 754 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 CXCL11O14625 94 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 JAK2O60674 1132 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 CTDNEP1O95476 244 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 IFNAR1P17181 557 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SMARCA1P28370 1054 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 GJB2P29033 226 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 BACE1P56817 501 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 MTMR2Q13614 643 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 NTRK3Q16288 839 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 CST9Q5W186 159 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 KCTD1Q719H9 257 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SPICE1Q8N0Z3 855 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 CMTR1Q8N1G2 835 aaKnown RBP9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SRBD1Q8N5C6 995 aaKnown RBP9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SMARCC2Q8TAQ2 1214 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 LPAR1Q92633 364 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 PHKBQ93100 1093 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 CLMNQ96JQ2 1002 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 SLC26A6Q9BXS9 759 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 ORC3Q9UBD5 711 aaPredicted RBP9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 FOCADQ5VW36 1801 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 MYH1P12882 1939 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 NID2Q14112 1375 aa9.32□□□□□ -0.92
MRPL40P1-201ENST00000542687 ECM29Q5VYK3 1845 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 TMEM232C9JQI7 657 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 PDCP20941 246 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 IKQ13123 557 aaPredicted RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 PPIL2Q13356 520 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 WASF1Q92558 559 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 OPTNQ96CV9 577 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 UBA5Q9GZZ9 404 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 EMILIN3Q9NT22 766 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 LAMB1P07942 1786 aa9.31□□□□□ -0.92
MRPL40P1-201ENST00000542687 IRF6O14896 467 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 DTNBO60941 627 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 DEXIO95424 95 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 HMGCS2P54868 508 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 HUNKP57058 714 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 FUT2Q10981 343 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 SH3D19Q5HYK7 790 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 KIAA1755Q5JYT7 1200 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 FAM83BQ5T0W9 1011 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 LARP1BQ659C4 914 aaKnown RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 TTBK2Q6IQ55 1244 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 RASGRP2Q7LDG7 609 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 NBPF11Q86T75 865 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 CNKSR2Q8WXI2 1034 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 RRP36Q96EU6 259 aaKnown RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 SPZ1Q9BXG8 430 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 RNF26Q9BY78 433 aaPredicted RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 FEM1BQ9UK73 627 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 CDK5RAP2Q96SN8 1893 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 PASKQ96RG2 1323 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 STK36Q9NRP7 1315 aa9.3□□□□□ -0.92
MRPL40P1-201ENST00000542687 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 H3BQV1 296 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 PLA2G6O60733 806 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 FDPSP14324 419 aaKnown RBP9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 XBP1P17861 261 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 SLC16A2P36021 539 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 STAT2P52630 851 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 HTRA3P83110 453 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 SNAPC2Q13487 334 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 TRIM29Q14134 588 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 SYDE2Q5VT97 1194 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 BTNL9Q6UXG8 535 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 FASTKD5Q7L8L6 764 aaKnown RBP9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 ADGRF4Q8IZF3 695 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 PIBF1Q8WXW3 757 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 WNK4Q96J92 1243 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 ALG1Q9BT22 464 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 TANGO6Q9C0B7 1094 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 RPAP3Q9H6T3 665 aaPredicted RBP9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 RIOX1Q9H6W3 641 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 KCNH4Q9UQ05 1017 aa9.29□□□□□ -0.92
MRPL40P1-201ENST00000542687 SIPA1L1O43166 1804 aa9.28□□□□□ -0.92
MRPL40P1-201ENST00000542687 A0A0G2JLL6 359 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms