RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PFKFB2O60825 505 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 DDAH1O94760 285 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CALM1P0DP23 149 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CALM2P0DP24 149 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CALM3P0DP25 149 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CERKLQ49MI3 558 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 IFIT1BQ5T764 474 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TDHQ8IZJ6 230 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SYMPKQ92797 1274 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 KLF18A0A0U1RQI7 1052 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ME3Q16798 604 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 FAM47AQ5JRC9 791 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 FAM109BQ6ICB4 259 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 APOA5Q6Q788 366 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 POTEB2H3BUK9 544 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TNFRSF10AO00220 468 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZBTB43O43298 467 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CCL5P13501 91 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 AKR1B1P15121 316 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 PDIA3P30101 505 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 PRMT2P55345 433 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 APOBRQ0VD83 1088 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ABCB5Q2M3G0 1257 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CATIPQ7Z7H3 387 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 KANSL2Q9H9L4 492 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 IL17RBQ9NRM6 502 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SYNGAP1Q96PV0 1343 aa14.36□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 DOCK1Q14185 1865 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 MYH4Q9Y623 1939 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CCDC196A0A1B0GTZ2 297 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 GOLGA8BA8MQT2 603 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TTLL1O95922 423 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TOP1P11387 765 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 U2AF1L4Q8WU68 220 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CEP95Q96GE4 821 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZKSCAN3Q9BRR0 538 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZNF341Q9BYN7 854 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 MTMR4Q9NYA4 1195 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 UNCXA6NJT0 531 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 GNRH1P01148 92 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ASNSP08243 561 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CAP2P40123 477 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 METAP2P50579 478 aaKnown RBP eCLIP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 LACTBP83111 547 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TAF1CQ15572 869 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CPLX2Q6PUV4 134 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 SNX27Q96L92 541 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 KAT14Q9H8E8 782 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
CACNA1C-IT3-201ENST00000542680 TMEM265A0A087WTH1 108 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 FAM196BA6NMK8 535 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MPHOSPH10O00566 681 aaKnown RBP14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CDKL5O76039 1030 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 LARGE1O95461 756 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SCRN1Q12765 414 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 TROAPQ12815 778 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MAFAQ8NHW3 353 aaPredicted RBP14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MKL1Q969V6 931 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 RNF208Q9H0X6 261 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ZFYVE28Q9HCC9 887 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ZBTB21Q9ULJ3 1066 aa14.33□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GOLGA8AA7E2F4 631 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NMT2O60551 498 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 KIF5BP33176 963 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 HMGN5P82970 282 aaKnown RBP14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ICA1Q05084 483 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NOL9Q5SY16 702 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms